G117382


Basic Information

Item Value
gene id G117382
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14786025 ~ 14786487 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU147083
CTCCTGGATTCCAGAACACTTAAACAATAGCCACTGAAAGACATTGTGCTctaagaatgtattatttttttataacctttTCGTTGTAAAGAACAATGATATCATATTGTGTGCTAGAGTagaatttaaaatcataataaacaatgaCTCACTGAGTTAATTTAGCTGCAATTCATCcacaagtgagagagagagagagagagagagaaccccACCCCCAACACTCACATCCAGTATGGGCCCGTTGCAATAGTGGCATCGGGGGGAGAACAGGTTGTGGTAGTCCCGCTCGCAGTAGGGCTGCCCGTCACGCTCAAAGAAGTTCCTGGAGCCGATCTCCTCCTGGCAGTGTGTGCACACAAAGTGCTCGGGGTGCCACGTCCTGCCCATTGCCGTCACCacctgtgggggagagagaaagacagacagatggagagaaagagaaaaagaaagggaaagataA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU147083 True 463 lncRNA 0.46 1 14786025 14786487

Neighbor

gene id symbol gene type direction distance location
AMCG00018588 bicdl1 coding upstream 54361 14707571 ~ 14731664 (+)
AMCG00018586 LOC107677981,LOC107567443 coding upstream 139193 14630062 ~ 14646832 (+)
AMCG00018585 NA coding upstream 171580 14599262 ~ 14614445 (+)
AMCG00018577 NA coding upstream 197997 14574260 ~ 14588028 (+)
AMCG00018581 NA coding upstream 228225 14554089 ~ 14557800 (+)
AMCG00018593 NA coding downstream 35504 14821991 ~ 14824758 (+)
AMCG00018600 NA coding downstream 45013 14831500 ~ 14834064 (+)
AMCG00018608 cldn5,LOC103357131 coding downstream 140675 14927162 ~ 14927524 (+)
AMCG00018603 ufd1l coding downstream 163149 14949636 ~ 14954263 (+)
AMCG00018611 ppil2 coding downstream 643797 15430284 ~ 15468382 (+)
G117381 NA non-coding upstream 1692 14783506 ~ 14784333 (+)
G117353 NA non-coding upstream 47698 14736096 ~ 14738327 (+)
G117209 NA non-coding upstream 251825 14533963 ~ 14534200 (+)
G117197 NA non-coding upstream 346934 14437992 ~ 14439091 (+)
G117131 NA non-coding upstream 540707 14244708 ~ 14245318 (+)
G117387 NA non-coding downstream 6309 14792796 ~ 14793804 (+)
G117388 NA non-coding downstream 7398 14793885 ~ 14794239 (+)
G117389 NA non-coding downstream 10044 14796531 ~ 14797150 (+)
G117380 NA non-coding downstream 68592 14855079 ~ 14899918 (+)
G117521 NA non-coding downstream 705759 15492246 ~ 15529341 (+)
G117379 rplp0,LOC107701857,LOC107654305,LOC107591459 other upstream 8915 14774115 ~ 14777110 (+)
AMCG00018567 NA other upstream 373746 14408958 ~ 14412279 (+)
AMCG00018564 mlec,LOC106579938 other upstream 386486 14330841 ~ 14399539 (+)
G117178 NA other upstream 438284 14345090 ~ 14347741 (+)
AMCG00018551 NA other upstream 543308 14239242 ~ 14242717 (+)
G117383 NA other downstream 136 14786623 ~ 14788133 (+)
AMCG00018602 LOC102789415 other downstream 168077 14954564 ~ 14981705 (+)
G117786 LOC101064881,LOC103134930,LOC106938822,LOC106933658,LOC103469853,LOC105937727 other downstream 2281725 17068212 ~ 17069670 (+)
AMCG00018681 NA other downstream 3194653 17981140 ~ 17983017 (+)
AMCG00018702 NA other downstream 3932719 18719206 ~ 18721343 (+)

Expression


Co-expression Network