G117383


Basic Information

Item Value
gene id G117383
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14786623 ~ 14788133 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU147084
CTGTCCAGCGATGGGTTTCTTGCAGGCCCCGCAGACACCCTTGGCCACTGTCTGGACTCCCAGCCGGTTCAGGTCGGACTGCAAGCTGCCCAGCATGTTGTCCAGCTTGTTCCCAGGTTTGGGGGCTCCGGTCGGGgatccccctcctcctcctgcacCCTTCCCCTGAGCCATgatctgagagggagagggagtgaaagagagagggggaaaagagaaagatggagggagagatgTGTCAGGCAAGAGTGCATCAGGTAAGAGAGGATTCAGGAGACGTTCTGCTGCACCAAAtctacaaacaaaccaacaaacagatCCTGAAGTCGCTGCTCCCAACAACTAGAGTTGTGAATTCTCTTAGTTTTCAGCATTTTCAGCAAAACCCTAATTTCCAGGAATCGACAGAAAATCATGGGCTGCAGAAGAAAGAGGCATcaatagaataaataaagtttCACGGTTCTCTTAACCAAACTGCCCAAGAACATCTCCTCACACCATGAAAGGGATGTTAAAATCCCCCGAGCACACAAACCCAAACACCATAAAACACGGCAACGCGGGCCACCACAAGAAAAGCACCGTCCCTCTAGTCTTGTCAATCAAGCACACAGTGTTGCTTTCCTGAGGTTTATTTGATGCCGAGACACACgggattattaaaaaaaaaaaaacagcacatagGCCCAGACCTGCAACCTGGGagatgaaagaaacaaagagatcattcaaatcaaacaaatgaaCTGCTTTAGCTGTACAGGCAATGCAGTGTGCACAACCTGCTATGCAACACAACCCAACGCAACAGCCTCTGGGGGGAGCTTCAGTATGGCCTCCAAGCTTCTGCgatgatttaaaacacagactatttgcacagacacacacacacatgcatacgtGCATACGTGCATGTGCACACGCATGTACGATCAGGAGCAACTCTGGCCATTATCTTGTGATTGGCAAACGGCAGTCGCATGCTGAGGAAGAAGAGGGAGGGGCCTCTTGCCTTGTCACCCAGgggcggggtggggggctggCAGGTGGAGAGAGTGTGGTCGTGCCAGAGGACAGGGGACGGTGCGAGCCTCTGTGGAGGGAAGGGCATAGTCATCAACCCAGGGGCTGCAGAAGGGGTAGGGATGCTGAGGTGTATTGAAGGGTCACTTCCAATACTGGAGGGGAGAACCAGAAGGGAATACTGGTTGTCTCTCCTCCCTTTggatcttaattgcttaattggctGGAATGGTTATTAGGATTAACCCtaggtttataaataaatatataaaacaaaacgcCACCCAGGGCTCTCACTCAGTAAACACAGGCCGGGCAGTTAGAGTGTGCTGGTGTGAAAGTGTGACACAAgaactacagaaataaaaagatggggggaggggaacaagggaaaaaaagaaaaaggattgTTCCATGCCTGCATTGGCGGAAAGAAGGGGTCCTCATCAGTCTGACAGGCTATAGACACCACAGCCTTTGGCGTG

Function

NR:

description
PREDICTED: protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU147084 True 1511 TUCP 0.50 1 14786623 14788133

Neighbor

gene id symbol gene type direction distance location
AMCG00018588 bicdl1 coding upstream 54959 14707571 ~ 14731664 (+)
AMCG00018586 LOC107677981,LOC107567443 coding upstream 139791 14630062 ~ 14646832 (+)
AMCG00018585 NA coding upstream 172178 14599262 ~ 14614445 (+)
AMCG00018577 NA coding upstream 198595 14574260 ~ 14588028 (+)
AMCG00018581 NA coding upstream 228823 14554089 ~ 14557800 (+)
AMCG00018593 NA coding downstream 33858 14821991 ~ 14824758 (+)
AMCG00018600 NA coding downstream 43367 14831500 ~ 14834064 (+)
AMCG00018608 cldn5,LOC103357131 coding downstream 139029 14927162 ~ 14927524 (+)
AMCG00018603 ufd1l coding downstream 161503 14949636 ~ 14954263 (+)
AMCG00018611 ppil2 coding downstream 642151 15430284 ~ 15468382 (+)
G117382 NA non-coding upstream 136 14786025 ~ 14786487 (+)
G117381 NA non-coding upstream 2290 14783506 ~ 14784333 (+)
G117353 NA non-coding upstream 48296 14736096 ~ 14738327 (+)
G117209 NA non-coding upstream 252423 14533963 ~ 14534200 (+)
G117197 NA non-coding upstream 347532 14437992 ~ 14439091 (+)
G117387 NA non-coding downstream 4663 14792796 ~ 14793804 (+)
G117388 NA non-coding downstream 5752 14793885 ~ 14794239 (+)
G117389 NA non-coding downstream 8398 14796531 ~ 14797150 (+)
G117380 NA non-coding downstream 66946 14855079 ~ 14899918 (+)
G117521 NA non-coding downstream 704113 15492246 ~ 15529341 (+)
G117379 rplp0,LOC107701857,LOC107654305,LOC107591459 other upstream 9513 14774115 ~ 14777110 (+)
AMCG00018567 NA other upstream 374344 14408958 ~ 14412279 (+)
AMCG00018564 mlec,LOC106579938 other upstream 387084 14330841 ~ 14399539 (+)
G117178 NA other upstream 438882 14345090 ~ 14347741 (+)
AMCG00018551 NA other upstream 543906 14239242 ~ 14242717 (+)
AMCG00018602 LOC102789415 other downstream 166431 14954564 ~ 14981705 (+)
G117786 LOC101064881,LOC103134930,LOC106938822,LOC106933658,LOC103469853,LOC105937727 other downstream 2280079 17068212 ~ 17069670 (+)
AMCG00018681 NA other downstream 3193007 17981140 ~ 17983017 (+)
AMCG00018702 NA other downstream 3931073 18719206 ~ 18721343 (+)
AMCG00018712 NA other downstream 4039464 18827597 ~ 18840095 (+)

Expression


Co-expression Network