G117472


Basic Information

Item Value
gene id G117472
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14979041 ~ 14980384 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU147187
agaagttatatgaaatcattgtattgtagtgaGACCTCAAGCAGACCactctttaattagtatcacaggtgtcttcaatcacATTGTGACTCATTCAgacagtttaaatggagaaagtactcactctgctgttttgtgtccctgtgtgtatcacactgaacatggaaaagggaaggaaaacctgttgtctgaggaggttagaaagaaggtaatagccaagcatggtcctacaagaccatctctaaagagcttAATGTTCCTGTGAGCACCATTGCCAATATTACACtgctaaaaaacaaattaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU147187 True 305 lncRNA 0.39 2 14979041 14980384

Neighbor

gene id symbol gene type direction distance location
AMCG00018604 NA coding downstream 21155 14957253 ~ 14957886 (-)
AMCG00018605 cdc45 coding downstream 30774 14939774 ~ 14948267 (-)
AMCG00018606 LOC106580435,LOC105014311,LOC108265487 coding downstream 56034 14899812 ~ 14923007 (-)
AMCG00018607 sept5 coding downstream 93690 14880599 ~ 14885351 (-)
AMCG00018601 NA coding downstream 103637 14874751 ~ 14875404 (-)
AMCG00018609 NA coding upstream 191578 15171962 ~ 15177670 (-)
AMCG00018610 NA coding upstream 256776 15237160 ~ 15292085 (-)
AMCG00018613 aacs,LOC107672615,LOC108255473 coding upstream 399359 15379743 ~ 15418462 (-)
AMCG00018612 bri3bp coding upstream 441531 15421915 ~ 15428751 (-)
AMCG00018614 mapk1,LOC107386038,LOC103371039 coding upstream 545906 15526290 ~ 15535846 (-)
G117441 NA non-coding downstream 121446 14856420 ~ 14857595 (-)
G117438 NA non-coding downstream 143316 14833856 ~ 14835725 (-)
G117432 NA non-coding downstream 194728 14780287 ~ 14784313 (-)
G117338 NA non-coding downstream 274583 14703640 ~ 14704458 (-)
G117319 NA non-coding downstream 342702 14635404 ~ 14636339 (-)
G117501 NA non-coding upstream 233784 15214168 ~ 15214431 (-)
G117646 tbx1 non-coding upstream 1042214 16022598 ~ 16025073 (-)
G117710 NA non-coding upstream 1314446 16294830 ~ 16296445 (-)
G117809 NA non-coding upstream 2173618 17154002 ~ 17155261 (-)
G117853 NA non-coding upstream 2485750 17466134 ~ 17466434 (-)
G117377 NA other downstream 240729 14736138 ~ 14738312 (-)
G117267 ywhag,143g1,ywhag1,LOC106603950,LOC108233911,LOC107387033 other downstream 458166 14503403 ~ 14520875 (-)
AMCG00018555 LOC107689851 other downstream 715887 14242545 ~ 14263154 (-)
AMCG00018528 LOC104956910,LOC107742399,LOC107591749,LOC106595856 other downstream 1251171 13645368 ~ 13727870 (-)
AMCG00018522 NA other downstream 1721791 13253085 ~ 13257250 (-)
AMCG00018617 ypel1,YPEL1,ypelc,ypel2b,LOC106931471,LOC103374080,LOC108277989,LOC106586007,LOC106940241 other upstream 518278 15498662 ~ 15518315 (-)
G117784 NA other upstream 2028514 17008898 ~ 17009301 (-)
G117823 NA other upstream 2245706 17226090 ~ 17256271 (-)
G117899 NA other upstream 2622972 17603356 ~ 17603848 (-)
G118075 NA other upstream 3485984 18466368 ~ 18474245 (-)

Expression


Co-expression Network