G117501


Basic Information

Item Value
gene id G117501
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 15214168 ~ 15214431 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU147223
aataaaactgggtgaggaacagccagactcagctaacagttcactgtcaaaagtcagacaccagggcaagactgagcacagcaacaagacacaaggcagttatactgcatcagcaaggtctctcccaggcagacatttcaaggcagacaggggtttccagatgtgctgtccaagctcttttgaagaagcacaaagaaacgggcaatgttgaggaccgtagacgcagtggtcggccaaggaaact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU147223 True 244 lncRNA 0.50 2 15214168 15214431

Neighbor

gene id symbol gene type direction distance location
AMCG00018609 NA coding downstream 36498 15171962 ~ 15177670 (-)
AMCG00018604 NA coding downstream 256282 14957253 ~ 14957886 (-)
AMCG00018605 cdc45 coding downstream 265901 14939774 ~ 14948267 (-)
AMCG00018606 LOC106580435,LOC105014311,LOC108265487 coding downstream 291161 14899812 ~ 14923007 (-)
AMCG00018607 sept5 coding downstream 328817 14880599 ~ 14885351 (-)
AMCG00018610 NA coding upstream 22729 15237160 ~ 15292085 (-)
AMCG00018613 aacs,LOC107672615,LOC108255473 coding upstream 165312 15379743 ~ 15418462 (-)
AMCG00018612 bri3bp coding upstream 207484 15421915 ~ 15428751 (-)
AMCG00018614 mapk1,LOC107386038,LOC103371039 coding upstream 311859 15526290 ~ 15535846 (-)
AMCG00018615 NA coding upstream 338273 15552704 ~ 15569734 (-)
G117472 NA non-coding downstream 233784 14979041 ~ 14980384 (-)
G117441 NA non-coding downstream 356573 14856420 ~ 14857595 (-)
G117438 NA non-coding downstream 378443 14833856 ~ 14835725 (-)
G117432 NA non-coding downstream 429855 14780287 ~ 14784313 (-)
G117338 NA non-coding downstream 509710 14703640 ~ 14704458 (-)
G117646 tbx1 non-coding upstream 808167 16022598 ~ 16025073 (-)
G117710 NA non-coding upstream 1080399 16294830 ~ 16296445 (-)
G117809 NA non-coding upstream 1939571 17154002 ~ 17155261 (-)
G117853 NA non-coding upstream 2251703 17466134 ~ 17466434 (-)
G117856 NA non-coding upstream 2300426 17514857 ~ 17515120 (-)
G117377 NA other downstream 475856 14736138 ~ 14738312 (-)
G117267 ywhag,143g1,ywhag1,LOC106603950,LOC108233911,LOC107387033 other downstream 693293 14503403 ~ 14520875 (-)
AMCG00018555 LOC107689851 other downstream 951014 14242545 ~ 14263154 (-)
AMCG00018528 LOC104956910,LOC107742399,LOC107591749,LOC106595856 other downstream 1486298 13645368 ~ 13727870 (-)
AMCG00018522 NA other downstream 1956918 13253085 ~ 13257250 (-)
AMCG00018617 ypel1,YPEL1,ypelc,ypel2b,LOC106931471,LOC103374080,LOC108277989,LOC106586007,LOC106940241 other upstream 284231 15498662 ~ 15518315 (-)
G117784 NA other upstream 1794467 17008898 ~ 17009301 (-)
G117823 NA other upstream 2011659 17226090 ~ 17256271 (-)
G117899 NA other upstream 2388925 17603356 ~ 17603848 (-)
G118075 NA other upstream 3251937 18466368 ~ 18474245 (-)

Expression


Co-expression Network