G117710


Basic Information

Item Value
gene id G117710
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 16294830 ~ 16296445 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU147479
cattttaaacaattccTCCTCATCTTCCTCTAATGTCTTAACCTCCTGCTCAGGGAGAGATACAATCGGTTCAAAGTGGGGGTCGTGGTTGGTGTCCTCTGTATTTTCTGTAGTGGGCTCAGGTTCTTCTGGTGTCCTTCGTATCTGCCATGTTGTGGGAGATGATGGTGGATTACAGGATGGTgttgtttgatttaaaagccgcccgtcctgctctctgtgtccctctcgcTTCCTGTTGCTCCTTTCGCGCTGAAATTTCCCTCTGCACATTGACCTCACTCCCAGCAGCCCCCGCGCCGCACTGGCCGCTAAATCACATCCCTTCTTTTCGCTTTCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU147479 True 342 lncRNA 0.51 2 16294830 16296445

Neighbor

gene id symbol gene type direction distance location
AMCG00018640 trmt2a,LOC107687689,LOC106580466,LOC107672731 coding downstream 1145 16289834 ~ 16293685 (-)
AMCG00018632 arvcf,LOC102781924 coding downstream 151494 16115965 ~ 16143336 (-)
AMCG00018633 arvcf coding downstream 198808 16089985 ~ 16096022 (-)
AMCG00018634 NA coding downstream 213504 16060706 ~ 16081326 (-)
AMCG00018631 NA coding downstream 243941 16032700 ~ 16050889 (-)
AMCG00018639 zdhhc8,LOC107707819 coding upstream 5469 16301914 ~ 16325216 (-)
AMCG00018642 LOC102797792,LOC102795364 coding upstream 82258 16378703 ~ 16391388 (-)
AMCG00018643 NA coding upstream 98511 16394956 ~ 16409595 (-)
AMCG00018644 chfr,LOC100195666,LOC106580459,LOC102788874 coding upstream 142186 16438631 ~ 16462363 (-)
AMCG00018645 NA coding upstream 168296 16464741 ~ 16485588 (-)
G117646 tbx1 non-coding downstream 269757 16022598 ~ 16025073 (-)
G117501 NA non-coding downstream 1080399 15214168 ~ 15214431 (-)
G117472 NA non-coding downstream 1314446 14979041 ~ 14980384 (-)
G117441 NA non-coding downstream 1437235 14856420 ~ 14857595 (-)
G117438 NA non-coding downstream 1459105 14833856 ~ 14835725 (-)
G117809 NA non-coding upstream 857557 17154002 ~ 17155261 (-)
G117853 NA non-coding upstream 1169689 17466134 ~ 17466434 (-)
G117856 NA non-coding upstream 1218412 17514857 ~ 17515120 (-)
G117888 NA non-coding upstream 1288306 17584751 ~ 17585098 (-)
G117916 NA non-coding upstream 1438231 17734676 ~ 17736324 (-)
AMCG00018617 ypel1,YPEL1,ypelc,ypel2b,LOC106931471,LOC103374080,LOC108277989,LOC106586007,LOC106940241 other downstream 776515 15498662 ~ 15518315 (-)
G117377 NA other downstream 1556518 14736138 ~ 14738312 (-)
G117267 ywhag,143g1,ywhag1,LOC106603950,LOC108233911,LOC107387033 other downstream 1773955 14503403 ~ 14520875 (-)
AMCG00018555 LOC107689851 other downstream 2031676 14242545 ~ 14263154 (-)
AMCG00018528 LOC104956910,LOC107742399,LOC107591749,LOC106595856 other downstream 2566960 13645368 ~ 13727870 (-)
G117784 NA other upstream 712453 17008898 ~ 17009301 (-)
G117823 NA other upstream 929645 17226090 ~ 17256271 (-)
G117899 NA other upstream 1306911 17603356 ~ 17603848 (-)
G118075 NA other upstream 2169923 18466368 ~ 18474245 (-)
AMCG00018687 NA other upstream 2241973 18538418 ~ 18547368 (-)

Expression


Co-expression Network