G117813


Basic Information

Item Value
gene id G117813
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 17250869 ~ 17253023 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU147627
CTGTAGGGGAATTTGCTGTGCTCTGGCATACTGTTCAACAGAGGGGACTGGGAACGAAATCCCCGCAGATCTAAATGGAGAAAACTCTTAGCTCATTGTTCTTCCTGGCTGAAAAAGTCCAGAATGACTTTCAAGGCAGTTGGCGATGGTGGCGGATTTTAAAACAGTCCCAACATAACCTGGGAAGCACCTCTCTCCTCCTCGGGCAAAAACAACTTCATCCTCAGCCTCGTCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU147627 True 237 lncRNA 0.49 2 17250869 17253023

Neighbor

gene id symbol gene type direction distance location
AMCG00018647 LOC106592780 coding upstream 101513 17141389 ~ 17149356 (+)
AMCG00018648 NA coding upstream 160847 17071354 ~ 17090022 (+)
AMCG00018641 NA coding upstream 816566 16419039 ~ 16434303 (+)
AMCG00018636 pgam5,LOC107089933 coding upstream 872168 16373896 ~ 16378701 (+)
AMCG00018638 ranbp1,LOC106580467,LOC107684983 coding upstream 952158 16296038 ~ 16298711 (+)
AMCG00018654 NA coding downstream 132 17253155 ~ 17256857 (+)
AMCG00018655 NA coding downstream 37679 17290702 ~ 17296987 (+)
AMCG00018659 taok3 coding downstream 293937 17546960 ~ 17574431 (+)
AMCG00018662 NA coding downstream 324912 17577935 ~ 17584564 (+)
AMCG00018663 NA coding downstream 332497 17585520 ~ 17593696 (+)
G117808 znrf3,LOC106584905 non-coding upstream 26260 17224012 ~ 17224609 (+)
G117805 NA non-coding upstream 89146 17161514 ~ 17161723 (+)
G117804 NA non-coding upstream 89829 17160762 ~ 17161040 (+)
G117801 NA non-coding upstream 95045 17153782 ~ 17155824 (+)
G117783 NA non-coding upstream 241623 17008898 ~ 17009246 (+)
G117887 NA non-coding downstream 331728 17584751 ~ 17585112 (+)
G117959 NA non-coding downstream 725988 17979011 ~ 17980939 (+)
G118005 LOC101154678 non-coding downstream 964780 18217803 ~ 18218099 (+)
G118013 NA non-coding downstream 1213345 18466368 ~ 18730812 (+)
G118043 LOC104945943 non-coding downstream 1421251 18674274 ~ 18676226 (+)
G117786 LOC101064881,LOC103134930,LOC106938822,LOC106933658,LOC103469853,LOC105937727 other upstream 181199 17068212 ~ 17069670 (+)
AMCG00018602 LOC102789415 other upstream 2269164 14954564 ~ 14981705 (+)
G117383 NA other upstream 2462736 14786623 ~ 14788133 (+)
G117379 rplp0,LOC107701857,LOC107654305,LOC107591459 other upstream 2473759 14774115 ~ 14777110 (+)
AMCG00018567 NA other upstream 2838590 14408958 ~ 14412279 (+)
AMCG00018681 NA other downstream 728117 17981140 ~ 17983017 (+)
AMCG00018702 NA other downstream 1466183 18719206 ~ 18721343 (+)
AMCG00018712 NA other downstream 1574574 18827597 ~ 18840095 (+)
AMCG00018717 trpv4,LOC106585668 other downstream 1641312 18894335 ~ 18908956 (+)
AMCG00018732 NA other downstream 1970145 19223168 ~ 19234351 (+)

Expression


Co-expression Network