G117856


Basic Information

Item Value
gene id G117856
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 17514857 ~ 17515120 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU147683
GTGCCAGTGTCTATTGGATTGCTTTTCCTGTTTCCTGCCACCAACTGGATGGCACCATCCCAGAGCTTACTGCTGGATTCTTCTGGGCATCTTGCAAACAGCAATTTAAATAGTCTGACATCACTTTTAACTTCCTGTATGCCGTTTTACACTTGGCACTAGATTAACTTGATTGGAAATTATCCCCCGCTtgttctgtatgtatttttgacTTCTAGCATCTCCTTTagactgtccctctgtctgGTTGTTTGAATATGGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU147683 True 264 lncRNA 0.42 1 17514857 17515120

Neighbor

gene id symbol gene type direction distance location
AMCG00018657 NA coding downstream 197982 17309143 ~ 17316875 (-)
AMCG00018658 NA coding downstream 210236 17298264 ~ 17304621 (-)
AMCG00018656 NA coding downstream 224318 17267589 ~ 17290539 (-)
AMCG00018653 znrf3,LOC106584905 coding downstream 290618 17179089 ~ 17224239 (-)
AMCG00018652 znrf3 coding downstream 346741 17156220 ~ 17168116 (-)
AMCG00018661 suds3,LOC102779790 coding upstream 1359 17516479 ~ 17529254 (-)
AMCG00018660 pebp1 coding upstream 59717 17574837 ~ 17576935 (-)
AMCG00018664 rfc5,LOC107668751,LOC107716544 coding upstream 79067 17594187 ~ 17600940 (-)
AMCG00018675 c21h12orf49,clg12h12orf49,LOC104923683,LOC104949818,LOC103134957,LOC107087327 coding upstream 278445 17793565 ~ 17797572 (-)
AMCG00018677 NA coding upstream 290536 17805656 ~ 17805925 (-)
G117853 NA non-coding downstream 48423 17466134 ~ 17466434 (-)
G117809 NA non-coding downstream 359596 17154002 ~ 17155261 (-)
G117710 NA non-coding downstream 1218412 16294830 ~ 16296445 (-)
G117646 tbx1 non-coding downstream 1489784 16022598 ~ 16025073 (-)
G117501 NA non-coding downstream 2300426 15214168 ~ 15214431 (-)
G117888 NA non-coding upstream 69631 17584751 ~ 17585098 (-)
G117916 NA non-coding upstream 219556 17734676 ~ 17736324 (-)
G117933 NA non-coding upstream 245430 17760550 ~ 17761560 (-)
G117978 NA non-coding upstream 349947 17865067 ~ 17866985 (-)
G117994 NA non-coding upstream 466709 17981829 ~ 18061544 (-)
G117823 NA other downstream 258586 17226090 ~ 17256271 (-)
G117784 NA other downstream 505556 17008898 ~ 17009301 (-)
AMCG00018617 ypel1,YPEL1,ypelc,ypel2b,LOC106931471,LOC103374080,LOC108277989,LOC106586007,LOC106940241 other downstream 1996542 15498662 ~ 15518315 (-)
G117377 NA other downstream 2776545 14736138 ~ 14738312 (-)
G117267 ywhag,143g1,ywhag1,LOC106603950,LOC108233911,LOC107387033 other downstream 2993982 14503403 ~ 14520875 (-)
G117899 NA other upstream 88236 17603356 ~ 17603848 (-)
G118075 NA other upstream 951248 18466368 ~ 18474245 (-)
AMCG00018687 NA other upstream 1023298 18538418 ~ 18547368 (-)
AMCG00018703 triap1,LOC106568193,LOC106564228 other upstream 1230014 18745134 ~ 18746820 (-)
AMCG00018715 ankrd13a other upstream 1322634 18837754 ~ 18845144 (-)

Expression


Co-expression Network