G117899


Basic Information

Item Value
gene id G117899
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 17603356 ~ 17603848 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU147734
agtcgCTTTAGAAAAAAAACGCCAACGCGACCAAAAACAGCGCAAGCATCCACTCCCGAtcagatcaatcaatcaatccgaTCAGACAATGGTTTCAGAGAGGGTCCGCTTTAAAGAAGAAAACGCCAGTATTATGTGGAAGGCGACTCCATTGGAAGCGTCCTGTCTGGATCCCCTCTCGGAGCGGGACTGCTGTCATCGGCGCAGTCCAGGTAGTGGTGCTGATGCTGAGGGCTCGGGCAGACACAATATAGAGCAATTCAAGAGAAATCAAATTAGATCTCAGCCTTCGCCTCAGCTCCGTGCAGCGCTTGTAAGCTTCAATCGAGGTAATAACCGGGTGGCTCAGGCTGGCACAGTGGGCACAGACGAGGCGCCGTGCGGATGGCGTTCAGAGGCGCTGTGTGCATTGGGTGCAGGTGCTCCCCGTCTCCCGTGCCAGCAGCTGCATCCCGGCTCTCTCCCTCCACACCGACATGTTGCCTGTCAATCA

Function

NR:

description
PREDICTED: ras-related protein Rap-2b-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU147734 True 493 TUCP 0.55 1 17603356 17603848

Neighbor

gene id symbol gene type direction distance location
AMCG00018664 rfc5,LOC107668751,LOC107716544 coding downstream 2416 17594187 ~ 17600940 (-)
AMCG00018660 pebp1 coding downstream 26421 17574837 ~ 17576935 (-)
AMCG00018661 suds3,LOC102779790 coding downstream 74102 17516479 ~ 17529254 (-)
AMCG00018657 NA coding downstream 286481 17309143 ~ 17316875 (-)
AMCG00018658 NA coding downstream 298735 17298264 ~ 17304621 (-)
AMCG00018675 c21h12orf49,clg12h12orf49,LOC104923683,LOC104949818,LOC103134957,LOC107087327 coding upstream 189717 17793565 ~ 17797572 (-)
AMCG00018677 NA coding upstream 201808 17805656 ~ 17805925 (-)
AMCG00018674 NA coding upstream 219821 17823669 ~ 17832605 (-)
AMCG00018676 fbxo21 coding upstream 230547 17834395 ~ 17840136 (-)
AMCG00018680 NA coding upstream 369587 17973435 ~ 17978220 (-)
G117888 NA non-coding downstream 18258 17584751 ~ 17585098 (-)
G117856 NA non-coding downstream 88236 17514857 ~ 17515120 (-)
G117853 NA non-coding downstream 136922 17466134 ~ 17466434 (-)
G117809 NA non-coding downstream 448095 17154002 ~ 17155261 (-)
G117710 NA non-coding downstream 1306911 16294830 ~ 16296445 (-)
G117916 NA non-coding upstream 130828 17734676 ~ 17736324 (-)
G117933 NA non-coding upstream 156702 17760550 ~ 17761560 (-)
G117978 NA non-coding upstream 261219 17865067 ~ 17866985 (-)
G117994 NA non-coding upstream 377981 17981829 ~ 18061544 (-)
G118008 NA non-coding upstream 696000 18299848 ~ 18300107 (-)
G117823 NA other downstream 347085 17226090 ~ 17256271 (-)
G117784 NA other downstream 594055 17008898 ~ 17009301 (-)
AMCG00018617 ypel1,YPEL1,ypelc,ypel2b,LOC106931471,LOC103374080,LOC108277989,LOC106586007,LOC106940241 other downstream 2085041 15498662 ~ 15518315 (-)
G117377 NA other downstream 2865044 14736138 ~ 14738312 (-)
G117267 ywhag,143g1,ywhag1,LOC106603950,LOC108233911,LOC107387033 other downstream 3082481 14503403 ~ 14520875 (-)
G118075 NA other upstream 862520 18466368 ~ 18474245 (-)
AMCG00018687 NA other upstream 934570 18538418 ~ 18547368 (-)
AMCG00018703 triap1,LOC106568193,LOC106564228 other upstream 1141286 18745134 ~ 18746820 (-)
AMCG00018715 ankrd13a other upstream 1233906 18837754 ~ 18845144 (-)
AMCG00018723 NA other upstream 1434709 19038557 ~ 19047717 (-)

Expression


Co-expression Network