G118008



Basic Information


Item Value
gene id G118008
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 18299848 ~ 18300107 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU147880
cagagtccagatcattaatatagattagaaaaagcaaaggccctagtactgatccctgtggaactccactaacaacctcactccagttagaaacaactcctctaatcgacaccctctgtttcctatacatcaaccagttcataatccatctacttacattaccctgaatgcctacagcttccaatttgaggatcagtctttggtgtggaaccttatcaaaagctttctgaaaatctaagtatatcatatcatatgctttc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU147880 True 260 lncRNA 0.39 1 18299848 18300107

Neighbor


gene id symbol gene type direction distance location
AMCG00018683 NA coding downstream 278634 18001743 ~ 18021214 (-)
AMCG00018682 NA coding downstream 314084 17984479 ~ 17985764 (-)
AMCG00018684 NA coding downstream 315939 17982629 ~ 17983909 (-)
AMCG00018680 NA coding downstream 321628 17973435 ~ 17978220 (-)
AMCG00018676 fbxo21 coding downstream 459712 17834395 ~ 17840136 (-)
AMCG00018690 NA coding upstream 229315 18529422 ~ 18532311 (-)
AMCG00018689 LOC106585651 coding upstream 235418 18535525 ~ 18535910 (-)
AMCG00018688 NA coding upstream 257234 18557341 ~ 18562421 (-)
AMCG00018696 NA coding upstream 273035 18573142 ~ 18575337 (-)
AMCG00018695 NA coding upstream 278020 18578127 ~ 18586515 (-)
G117994 NA non-coding downstream 238304 17981829 ~ 18061544 (-)
G117978 NA non-coding downstream 432863 17865067 ~ 17866985 (-)
G117933 NA non-coding downstream 538288 17760550 ~ 17761560 (-)
G117916 NA non-coding downstream 563524 17734676 ~ 17736324 (-)
G117888 NA non-coding downstream 714750 17584751 ~ 17585098 (-)
G118010 NA non-coding upstream 13892 18313999 ~ 18314242 (-)
G118101 NA non-coding upstream 352659 18652766 ~ 18659398 (-)
G118100 NA non-coding upstream 356358 18656465 ~ 18657534 (-)
G118115 srsf9,LOC107692023,LOC107560829,LOC105025588 non-coding upstream 432981 18733088 ~ 18733820 (-)
G118147 NA non-coding upstream 582952 18883059 ~ 18885984 (-)
G117899 NA other downstream 696000 17603356 ~ 17603848 (-)
G117823 NA other downstream 1043577 17226090 ~ 17256271 (-)
G117784 NA other downstream 1290547 17008898 ~ 17009301 (-)
AMCG00018617 ypel1,YPEL1,ypelc,ypel2b,LOC106931471,LOC103374080,LOC108277989,LOC106586007,LOC106940241 other downstream 2781533 15498662 ~ 15518315 (-)
G117377 NA other downstream 3561536 14736138 ~ 14738312 (-)
G118075 NA other upstream 166261 18466368 ~ 18474245 (-)
AMCG00018687 NA other upstream 238311 18538418 ~ 18547368 (-)
AMCG00018703 triap1,LOC106568193,LOC106564228 other upstream 445027 18745134 ~ 18746820 (-)
AMCG00018715 ankrd13a other upstream 537647 18837754 ~ 18845144 (-)
AMCG00018723 NA other upstream 738450 19038557 ~ 19047717 (-)

Expression



Co-expression Network