Gene
RNA
| Item | Value |
|---|---|
| gene id | G118010 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 18313999 ~ 18314242 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| threonine--tRNA ligase, cytoplasmic-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU147882 | True | 244 | lncRNA | 0.45 | 1 | 18313999 | 18314242 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00018683 | NA | coding | downstream | 292785 | 18001743 ~ 18021214 (-) |
| AMCG00018682 | NA | coding | downstream | 328235 | 17984479 ~ 17985764 (-) |
| AMCG00018684 | NA | coding | downstream | 330090 | 17982629 ~ 17983909 (-) |
| AMCG00018680 | NA | coding | downstream | 335779 | 17973435 ~ 17978220 (-) |
| AMCG00018676 | fbxo21 | coding | downstream | 473863 | 17834395 ~ 17840136 (-) |
| AMCG00018690 | NA | coding | upstream | 215180 | 18529422 ~ 18532311 (-) |
| AMCG00018689 | LOC106585651 | coding | upstream | 221283 | 18535525 ~ 18535910 (-) |
| AMCG00018688 | NA | coding | upstream | 243099 | 18557341 ~ 18562421 (-) |
| AMCG00018696 | NA | coding | upstream | 258900 | 18573142 ~ 18575337 (-) |
| AMCG00018695 | NA | coding | upstream | 263885 | 18578127 ~ 18586515 (-) |
| G118008 | NA | non-coding | downstream | 13892 | 18299848 ~ 18300107 (-) |
| G117994 | NA | non-coding | downstream | 252455 | 17981829 ~ 18061544 (-) |
| G117978 | NA | non-coding | downstream | 447014 | 17865067 ~ 17866985 (-) |
| G117933 | NA | non-coding | downstream | 552439 | 17760550 ~ 17761560 (-) |
| G117916 | NA | non-coding | downstream | 577675 | 17734676 ~ 17736324 (-) |
| G118101 | NA | non-coding | upstream | 338524 | 18652766 ~ 18659398 (-) |
| G118100 | NA | non-coding | upstream | 342223 | 18656465 ~ 18657534 (-) |
| G118115 | srsf9,LOC107692023,LOC107560829,LOC105025588 | non-coding | upstream | 418846 | 18733088 ~ 18733820 (-) |
| G118147 | NA | non-coding | upstream | 568817 | 18883059 ~ 18885984 (-) |
| G118223 | NA | non-coding | upstream | 864239 | 19178481 ~ 19178740 (-) |
| G117899 | NA | other | downstream | 710151 | 17603356 ~ 17603848 (-) |
| G117823 | NA | other | downstream | 1057728 | 17226090 ~ 17256271 (-) |
| G117784 | NA | other | downstream | 1304698 | 17008898 ~ 17009301 (-) |
| AMCG00018617 | ypel1,YPEL1,ypelc,ypel2b,LOC106931471,LOC103374080,LOC108277989,LOC106586007,LOC106940241 | other | downstream | 2795684 | 15498662 ~ 15518315 (-) |
| G117377 | NA | other | downstream | 3575687 | 14736138 ~ 14738312 (-) |
| G118075 | NA | other | upstream | 152126 | 18466368 ~ 18474245 (-) |
| AMCG00018687 | NA | other | upstream | 224176 | 18538418 ~ 18547368 (-) |
| AMCG00018703 | triap1,LOC106568193,LOC106564228 | other | upstream | 430892 | 18745134 ~ 18746820 (-) |
| AMCG00018715 | ankrd13a | other | upstream | 523512 | 18837754 ~ 18845144 (-) |
| AMCG00018723 | NA | other | upstream | 724315 | 19038557 ~ 19047717 (-) |
