G118075


Basic Information

Item Value
gene id G118075
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 18466368 ~ 18474245 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU147953
ttgttttgttccattgctatatacactcacctaaaggattattaggaacacctgttcaatttctcattaatgcaattatctaaccaaccaatcacatggcagttgcttcaatgcctttaggggtgtggtcctggtcaagacaatctcctgaactccaaactgaatgtctgaatgggaaagaaaggtgatttaagcaattttgagtgtggcatggttgttggtcggtcggccggtctgagtatttcacaatctgctcagttactgggattttcacgcacaaccatttctagggtttacaaagaatggtgtgaaaagggaaaaacatccagtatgcggcagtcctgtgggcgaaaatgccttgttgatgctagaggtcagaggagaatgggccgactgattcaagctgatagaagagcaactttgactgaaataaccactcgttACAAGGTAACGAGTTAcgaggtatgcagcaaagcatttgtgaagccacaacacGTACAACCTTGAGGCG

Function

GO:

id name namespace
GO:0007219 Notch signaling pathway biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU147953 True 511 TUCP 0.43 2 18466368 18474245

Neighbor

gene id symbol gene type direction distance location
AMCG00018683 NA coding downstream 445154 18001743 ~ 18021214 (-)
AMCG00018682 NA coding downstream 480604 17984479 ~ 17985764 (-)
AMCG00018684 NA coding downstream 482459 17982629 ~ 17983909 (-)
AMCG00018680 NA coding downstream 488148 17973435 ~ 17978220 (-)
AMCG00018676 fbxo21 coding downstream 626232 17834395 ~ 17840136 (-)
AMCG00018690 NA coding upstream 55177 18529422 ~ 18532311 (-)
AMCG00018689 LOC106585651 coding upstream 61280 18535525 ~ 18535910 (-)
AMCG00018688 NA coding upstream 83096 18557341 ~ 18562421 (-)
AMCG00018696 NA coding upstream 98897 18573142 ~ 18575337 (-)
AMCG00018695 NA coding upstream 103882 18578127 ~ 18586515 (-)
G118010 NA non-coding downstream 152126 18313999 ~ 18314242 (-)
G118008 NA non-coding downstream 166261 18299848 ~ 18300107 (-)
G117994 NA non-coding downstream 404824 17981829 ~ 18061544 (-)
G117978 NA non-coding downstream 599383 17865067 ~ 17866985 (-)
G117933 NA non-coding downstream 704808 17760550 ~ 17761560 (-)
G118101 NA non-coding upstream 178521 18652766 ~ 18659398 (-)
G118100 NA non-coding upstream 182220 18656465 ~ 18657534 (-)
G118115 srsf9,LOC107692023,LOC107560829,LOC105025588 non-coding upstream 258843 18733088 ~ 18733820 (-)
G118147 NA non-coding upstream 408814 18883059 ~ 18885984 (-)
G118223 NA non-coding upstream 704236 19178481 ~ 19178740 (-)
G117899 NA other downstream 862520 17603356 ~ 17603848 (-)
G117823 NA other downstream 1210097 17226090 ~ 17256271 (-)
G117784 NA other downstream 1457067 17008898 ~ 17009301 (-)
AMCG00018617 ypel1,YPEL1,ypelc,ypel2b,LOC106931471,LOC103374080,LOC108277989,LOC106586007,LOC106940241 other downstream 2948053 15498662 ~ 15518315 (-)
G117377 NA other downstream 3728056 14736138 ~ 14738312 (-)
AMCG00018687 NA other upstream 64173 18538418 ~ 18547368 (-)
AMCG00018703 triap1,LOC106568193,LOC106564228 other upstream 270889 18745134 ~ 18746820 (-)
AMCG00018715 ankrd13a other upstream 363509 18837754 ~ 18845144 (-)
AMCG00018723 NA other upstream 564312 19038557 ~ 19047717 (-)
AMCG00018742 wscd2,LOC106584983,LOC105898177 other upstream 993523 19467768 ~ 19498979 (-)

Expression


Co-expression Network