G118101


Basic Information

Item Value
gene id G118101
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 18652766 ~ 18659398 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU147981
gagaaattgaacaggtgttcctaataatcctttaggtgagtgtatataaagaATCCTATGTCCTGCttatgcattgttatttttttttctgtaggaTAATTCTTTATATCAAAAGAGCAGTGATCACGTCTAGATAGTATCATGGATGTGTGAGCAGCGTTGAGTAATTTATGAATGTAGCGTGATTGATTTGCTGGGCTTTCTCGGTTGTACTGTGAACCACATCATAGAGGCATCTATAGTTTCCGCTTTCATCCAGTTTTGAAAGCCAGACTCCATAACCCACTCGCTATAGCTGACCAGGTCTGCTTGACCAGTCAAAATCAACTTTGACTTCCAAGCACAGCGTCGAGGTAGTTCACAACTGTGTACTGAAACGCTCTCCTAAGTGTGGGCAGATCAAAAGTGGATTTGGGAACagtgaaaataagaaatactgATGCAGTGAGCTGTCAGTGCACCAGACTCATCATGTGTGATCTGAGTGAAAATGAACAGGTTGTGGGAGAATGAGCTTGGTAATTAACGATGATATCATCGTATTAAATGAACACGTTCAGCCTTACCTGGACCGGGCAGCGAGAATGGCCTTGTGTGCTGGGCGAGGGTGGCCATCTAACAGGAGGGTGATGTCACAGAACTCCAGTCCAGCTCCCTCCAGACACGCCTTCATGTCCTGGACCAGAGACGTTCCTGCAAAGCAACACGAAGATGAAAGGCCACAAGAGCACCGCCTCAGCTTTCCAGAGGTAccataaaaaaatctaacaaacatCACAGCAGCATTCTgggaaaccaaaaaacacacactgtgcatCTCCTAGAATGTGTCACAATCTAAAAAAAGGATACATGtgcacagatttgtatttatctatgatttaaaatgatagGCAAATGGATGTAAATTGCCCAAACAATGTCAATGTGGTCTACAGTGATGCGAGTGGGTGAGATTCAGCACACAGGTACCTATATCCACTGGCTGGTCTGAGTACACCCGAGGAGGAGGCTGCTGCTTCCTGCGCACGATCTCCACTATCAGAGGGGTGGACAGACGCTCGAACTCTTTGGTCATGATCACCTGGTTAAAGTGAGTCTCCTTCACCACAAAGTTAAGGCAGTGCTCCTGAAATGACACACGCGAGAACATTATACAAAatcaagacaaagaaaaatcGGCTGATAGAAACGTGAAATGGGCCGTTTTCTGATTCGGCTGAGCTTTTGAGTCTTCATCACGTAAGCTTGACTGGACGGCAGTGAAGACAGGAGGTCCTACCTTGAGCTGGTCCAGCTGCAGCTTGTTGGCGTTCTCACACACGATCAGGACATTCTGCAGGTCAACAGAGGCCTCGATGTACTGCACACACAGCTGCTCCAGACGGGACAGCTTGAAGCTCAGGGCCAGCTTATACACATCCATGATCAAGAGGACGTCCTGAACGTGCCCTGAGGAAAACAGCGACAGGCCAGAACATTAGGGATCACCATTATTTCAGCAGCACACACAGTGGGGCAACTCAGGGCTCTAGCGCTCGCTATTCAACACTGTTAGGAAAAAACTAACTTTCATCGTTtaaaggaaagcaaacaaaacaatctgctcTACAAAACTCTCGTTGTATTTTAAGCatcaaaaacacagaacaactTTTTGTTTGCTGACTGTTTTGGCCGCTGAGGGCACTACCTTTGCGTGGGTATTTGATTTTGTCCGTGTACAGGAATTGCATGAGCACTTCGAAGGGCTGAGCCTCGGCCTCGCGGATGGGCACCTCCAGAAGGGGCTGTGAGCGCGACGCCCTGCTGCCACCCCCCGCCGCCTCCTTTTGAGCGCCACACACCGCTTCGTCTTCCTCGCTCTCCTGCTTACACTTCTGCACAGAGACGCCCAAGAGGACCAGCCACCTGCACCGGGCCGTCACAATCGCAATGTGGCCCTTCACGCGCTCCTCCTTCTGCGGTTGAGAAGAGGAAGACGAGACAGTGAGAGCAAGTCTCGTTAGGGAGATGGCAGTTGGGCAGCTTGTCGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU147981 True 2037 lncRNA 0.48 3 18652766 18659398

Neighbor

gene id symbol gene type direction distance location
AMCG00018699 NA coding downstream 9617 18642499 ~ 18643149 (-)
AMCG00018694 NA coding downstream 18638 18606248 ~ 18634128 (-)
AMCG00018695 NA coding downstream 66251 18578127 ~ 18586515 (-)
AMCG00018696 NA coding downstream 77429 18573142 ~ 18575337 (-)
AMCG00018688 NA coding downstream 90345 18557341 ~ 18562421 (-)
AMCG00018704 NA coding upstream 1856 18661254 ~ 18663368 (-)
AMCG00018705 pes1,LOC106585655,LOC102794482,LOC101476782 coding upstream 15391 18674789 ~ 18683596 (-)
AMCG00018706 pole coding upstream 41534 18700932 ~ 18718832 (-)
AMCG00018709 NA coding upstream 64300 18723698 ~ 18725941 (-)
AMCG00018707 gatc,LOC102777901 coding upstream 77007 18736405 ~ 18737332 (-)
G118010 NA non-coding downstream 338524 18313999 ~ 18314242 (-)
G118008 NA non-coding downstream 352659 18299848 ~ 18300107 (-)
G117994 NA non-coding downstream 591222 17981829 ~ 18061544 (-)
G117978 NA non-coding downstream 785781 17865067 ~ 17866985 (-)
G117933 NA non-coding downstream 891206 17760550 ~ 17761560 (-)
G118115 srsf9,LOC107692023,LOC107560829,LOC105025588 non-coding upstream 73690 18733088 ~ 18733820 (-)
G118147 NA non-coding upstream 223661 18883059 ~ 18885984 (-)
G118223 NA non-coding upstream 519083 19178481 ~ 19178740 (-)
G118238 NA non-coding upstream 561899 19221297 ~ 19221632 (-)
G118239 NA non-coding upstream 565274 19224672 ~ 19227434 (-)
AMCG00018687 NA other downstream 105398 18538418 ~ 18547368 (-)
G118075 NA other downstream 178521 18466368 ~ 18474245 (-)
G117899 NA other downstream 1048918 17603356 ~ 17603848 (-)
G117823 NA other downstream 1396495 17226090 ~ 17256271 (-)
G117784 NA other downstream 1643465 17008898 ~ 17009301 (-)
AMCG00018703 triap1,LOC106568193,LOC106564228 other upstream 85736 18745134 ~ 18746820 (-)
AMCG00018715 ankrd13a other upstream 178356 18837754 ~ 18845144 (-)
AMCG00018723 NA other upstream 379159 19038557 ~ 19047717 (-)
AMCG00018742 wscd2,LOC106584983,LOC105898177 other upstream 808370 19467768 ~ 19498979 (-)
G118434 NA other upstream 1328276 19987674 ~ 19988168 (-)

Expression


Co-expression Network