G118147


Basic Information

Item Value
gene id G118147
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 18883059 ~ 18885984 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU148054
CATGATCACAATGTAACAGCTCAGTTTATTTCCATAAATATTAGAATACATCAGTGTAGAATGATATACTTGTGCTTGTTCTGTACAATAAATAGTCACATTTCTAAATTTCAAACACTTGTACAATTGTAACTAAAGCAGGAACATCAACCAATTATTTAGTCTTCACTGTTACAAGGTTAAGCCAATTCATGTTTCAGTTTTGGAATTAGATAATCTACAAGTCaagtaaaaacacatacagtacttAAGACAACCCTGGCCTCTTTAGTGCAGTGAGTGGTAAATAGCAAAGTGCAGTATAAAACCATACAGCCGGTCAGTTAATATTGCACTAAGTAGAGGCATGCCGGTGACTAACAGATTAATTGTAGCTAGCTCACTAAGAGAGAAGGCAGAGCAAGGTCTCAGTTTGGTCCAGCAAGAAAAttaatagaaagaaaaacatattaatggGTAtgattttgttgcattttcaatACGCACATTTTCAAATCACTATCGGATATATGTAGCAGGAAGACAACATGGTAAAAGCAATATTATCCCCAAACCCCTATGTATTTCCAGTATCATCCAAGTAAAGtgaatatatatcaatatgtaCTTAATAATACACCTTCTAATTTCTATGTTAAGGAGTAGCTGATATAATTGTTGATTTCCTGCCATTTTTCATACATTGTTTCCTGTCATGTGATCTGTACCAGCCTGTTATAATAAACCTATGCTAATTTACCATCCAGTTGTAAAGCACAGAAAATgtaacaaagtaaaaataaaaggtataGCAAAAGTTGAATAGACTATGCAGCATGCACTATGACAATGCACATGGCACCAcctcctcatttaaatgcaatggaCATTAGCTTACAGAGCatctaaataaattactttgaaGGCCTAGGTACGCTTATGAAATGGACACTTtgactttaataattaaaatcaaaaacgACAACCACTGCTCTCATGACTTCCACATTTGAGGTGGGTGGATACAAGGTTGATCTTTGCTACATATTTCTCGTCATTAGACCTTTAGTTGTTAACTTCCCCTCCCCATCTTGGATTCATTATCTTTAaacaagcatttgttttttatgaagaGCATTTGGACAGATGTGCTAATTAATACTCCTATATTATTTTTGGTGTACTTTTTTGGACTCTTTTTTTGTATCACCAAATAGGAACAGGAATGAACAAGCAAACATGCAGAGATCGTAATGCGACAGTTTATTAAAGCTCTGATCAGGATTGTCCTGTCTAACTGTACAGTAAAATGCATCTTTCCTCTCATGGCGAGACAAAGACAAAATTATACTTTGTTGTTGTCCCTTTAAGACGACACTGTAAAACCTTCACATCTTATGAAAAAGCTGTAAAATATTGACAAGCTCCTTAGAACTCAGAAGTTAATGAAGCCTTTGGGAACtgccattttcaaaatattcattttcaaaatactttagtgagAGCTGCACAGTCCCAAGAGAAAGGGGATGGAGGATTTCTGATTCTGTGAAGATGCCTCTttacaaacatttcacattagAGTTCTTTATCATCAGAAATGTTCACATTAAGAACAATAATTTACAAGTTAAtatcaaacaaatgcatgaCAAGCCCCCAGAATGAATGTTAAAAAAGCAAGCTTGCAGTTTTTTGTGATCTTGTCTACATTTTACCATTTACATGTTATGACCTAAGAAATGGAGCTCAAAGAATCCTAAAGCATGGaagaacagaaaatatttgtctGGTACGGTGTCTGCCTGGCTCATTTCATGCCAATTTCCCCCCACATTCAAAACCTAATCTTATGGAGCAGAGCTGTACAGCGCATTCTTGTCATAGTTACATTTGTGAGAAAAGAAGGGCTAAGGTCCATGAACATTTCCCACAAGTAGAGACTGAGGGGAATAAAGTAACAGCCCCACAAAATCATCAGCAGGGATGTATGTGGAAGTGAAAGGAATGTGGTTAAAAATATAACCAAAACTTCCAGCATTTCAACTATTAGTATGTAATAAAGGAAAATCCTCAACAACAACTTCAAAACACATACGAGTAAATCTGGGTTTCACTCCTTTAACAGCCAAACAAACATCCATTCATGACTATCATTCTCCAAATCACTGAGACACCAAATCCCTGGAAAATCCGGATTAACCTTAGGCCACACACTGTAATATTCCTAATACAGTATGTTGGACTCAattttgtgtAGATGAACGGCGATGACATTTTCAAGTTGCCGGTGACTGACTGAGTTAAGGTAGACTTGAATGACAATAAATtcagataaaaatgaaattcttTCCATGTTTTTGGAAATGGGCTTCTGAAGGACGACCCGCTTTTTCAAAGGCAAGGCAAATGATTAAAAAGTGCACTTACTACATTCAGTTGACAGTATTATTCCCTGGTGTGTCAGTTATAAAAGTAAGGCACACTatattgcatacatttaaaacacccTCCTCTATCCCAGGTTAACAAGCCATGTGAGCTGAGAAAGCACCACTTATGTCCCCAGAGTGGTGATCAAGAAGTAGAACAGGGTCTCCATATTGCTCTTGAAAATGGCATCCTTGGCAGGATGGAAagtaaaaaatagtaataaaaagaTAGTGACTGCATTGTGTAAGTCTGGCAAGGAGGGTGGGGTGGGTAGGGGTCAGACAGTGTAGTCCAGTTCGGCGTTCATTTTGGTATACATCTCATAGAGGACGTCCACAGTGGCAGTGTAATTGACCAGGAACTGGCGGATCTTCTCCACACAGTCTTCCTCCTTCACCTCACGACCTTTGGACAGGGCCTTCAGGAAGTCCGACTTGTACGGAGCCGCATACATGGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148054 True 2870 lncRNA 0.37 2 18883059 18885984

Neighbor

gene id symbol gene type direction distance location
AMCG00018714 NA coding downstream 7443 18869934 ~ 18875616 (-)
AMCG00018713 LOC106585677,LOC105014449 coding downstream 106655 18750445 ~ 18776404 (-)
AMCG00018707 gatc,LOC102777901 coding downstream 145727 18736405 ~ 18737332 (-)
AMCG00018709 NA coding downstream 157118 18723698 ~ 18725941 (-)
AMCG00018706 pole coding downstream 164227 18700932 ~ 18718832 (-)
AMCG00018718 NA coding upstream 38524 18924508 ~ 18936316 (-)
AMCG00018722 NA coding upstream 165954 19051938 ~ 19056035 (-)
AMCG00018721 ube3b,LOC106585662,LOC106580104 coding upstream 172793 19058777 ~ 19071999 (-)
AMCG00018728 NA coding upstream 192865 19078849 ~ 19088464 (-)
AMCG00018727 acacb coding upstream 232312 19118296 ~ 19148083 (-)
G118115 srsf9,LOC107692023,LOC107560829,LOC105025588 non-coding downstream 149239 18733088 ~ 18733820 (-)
G118101 NA non-coding downstream 223661 18652766 ~ 18659398 (-)
G118100 NA non-coding downstream 225525 18656465 ~ 18657534 (-)
G118010 NA non-coding downstream 568817 18313999 ~ 18314242 (-)
G118008 NA non-coding downstream 582952 18299848 ~ 18300107 (-)
G118223 NA non-coding upstream 292497 19178481 ~ 19178740 (-)
G118238 NA non-coding upstream 335313 19221297 ~ 19221632 (-)
G118239 NA non-coding upstream 338688 19224672 ~ 19227434 (-)
G118266 NA non-coding upstream 447324 19333308 ~ 19335777 (-)
G118289 NA non-coding upstream 573942 19459926 ~ 19460509 (-)
AMCG00018715 ankrd13a other downstream 37915 18837754 ~ 18845144 (-)
AMCG00018703 triap1,LOC106568193,LOC106564228 other downstream 136239 18745134 ~ 18746820 (-)
AMCG00018687 NA other downstream 335691 18538418 ~ 18547368 (-)
G118075 NA other downstream 408814 18466368 ~ 18474245 (-)
G117899 NA other downstream 1279211 17603356 ~ 17603848 (-)
AMCG00018723 NA other upstream 152573 19038557 ~ 19047717 (-)
AMCG00018742 wscd2,LOC106584983,LOC105898177 other upstream 581784 19467768 ~ 19498979 (-)
G118434 NA other upstream 1101690 19987674 ~ 19988168 (-)
G118477 NA other upstream 1192104 20078088 ~ 20079882 (-)
AMCG00018788 LOC107579725 other upstream 1552975 20438959 ~ 20458617 (-)

Expression


Co-expression Network