G118479


Basic Information

Item Value
gene id G118479
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 20081388 ~ 20081663 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU148464
AACAATATAGGTAACATCTATGCCCCTTGaattaaagaatataaaaaagtGGCAAGATTTATCTGAAAAGCTCTTGGTCACTTCCATAGGCCTTTTCAAGGAAAAATAAGTGATTAGAAATGCAAGAGGCAGCCCTGACTCACATTGCAGCTGTGATTGATGAACCTGGCAAAGTTGCCGCACTTGGTGGCGTCGATGATGGTGTCGTGATCCACCCTGAACATGTAGCTGCTCCCGATGCCCTCGTCCTCGTAGCGTTTCTCCCGCATGTCGGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148464 True 276 lncRNA 0.46 1 20081388 20081663

Neighbor

gene id symbol gene type direction distance location
AMCG00018765 NA coding downstream 31145 20036729 ~ 20050243 (-)
AMCG00018766 NA coding downstream 48881 19991333 ~ 20032507 (-)
AMCG00018760 NA coding downstream 124121 19923370 ~ 19957267 (-)
AMCG00018761 LOC106579932,LOC105014887 coding downstream 168116 19894850 ~ 19913272 (-)
AMCG00018756 NA coding downstream 209494 19864992 ~ 19871894 (-)
AMCG00018771 hpd,LOC107092762,LOC103375816,LOC101157460,LOC100693609,LOC103398068 coding upstream 5477 20087140 ~ 20094506 (-)
AMCG00018777 vps33a,LOC106585293 coding upstream 136714 20218377 ~ 20225057 (-)
AMCG00018780 NA coding upstream 147508 20229171 ~ 20279538 (-)
AMCG00018778 NA coding upstream 222101 20303764 ~ 20309717 (-)
AMCG00018779 rsrc2,LOC106585280 coding upstream 231522 20313185 ~ 20321631 (-)
G118478 NA non-coding downstream 1061 20079966 ~ 20080327 (-)
G118476 NA non-coding downstream 3496 20077276 ~ 20077892 (-)
G118475 NA non-coding downstream 4346 20076825 ~ 20077042 (-)
G118474 NA non-coding downstream 7227 20073351 ~ 20074161 (-)
G118470 LOC107758578,LOC107746221,LOC107658592,LOC107689149,LOC107558115 non-coding downstream 21979 20058972 ~ 20059409 (-)
G118502 NA non-coding upstream 34788 20116451 ~ 20124488 (-)
G118515 NA non-coding upstream 71064 20152727 ~ 20152987 (-)
G118518 NA non-coding upstream 86455 20168118 ~ 20168331 (-)
G118536 NA non-coding upstream 133107 20214770 ~ 20217179 (-)
G118692 NA non-coding upstream 401221 20482884 ~ 20485106 (-)
G118477 NA other downstream 1506 20078088 ~ 20079882 (-)
G118434 NA other downstream 93220 19987674 ~ 19988168 (-)
AMCG00018742 wscd2,LOC106584983,LOC105898177 other downstream 582409 19467768 ~ 19498979 (-)
AMCG00018723 NA other downstream 1033671 19038557 ~ 19047717 (-)
AMCG00018715 ankrd13a other downstream 1236244 18837754 ~ 18845144 (-)
AMCG00018788 LOC107579725 other upstream 357296 20438959 ~ 20458617 (-)
AMCG00018790 LOC101483632,LOC102787753,LOC106585272,LOC107722332,LOC107554528 other upstream 407272 20488935 ~ 20523819 (-)
AMCG00018794 cdk2ap1,LOC105905088,LOC105026112,LOC108438487 other upstream 521832 20603495 ~ 20606743 (-)
AMCG00018797 NA other upstream 563222 20644885 ~ 20678437 (-)
AMCG00018805 eif2b1,LOC106580370,LOC106585290 other upstream 602003 20683666 ~ 20689922 (-)

Expression


Co-expression Network