G118566


Basic Information

Item Value
gene id G118566
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 20279288 ~ 20299830 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU148570
cagaggaggaggaggaggaggaggtcgAGGTCTTGGCTGCAGCACCTGCAGGTTTGGCGATCTTGCTGGGTGCTTTCAACCCACTGGGTTTCAGCAGGCTCATGTTTTCCCCTTTGTGCTGTGGGAGTCTGCTGGCCTTTGTCTGTCAGTGGGGGCTATCCCTTCCCGACCATGGACTCAACTACTCCGCTCGGATACGGCGCCCGTCTTTGGCAAAGAAGGTTTCaaaaagaaaggggggaaaaaaaaaactaaacaaacaaaaaaaaaaaaaACCTGTTACGTCCCGCTTTATACTTGGCCGTTTAGTAAACCCACTCCACTATCTTGCCGACTCCTACCAGACAGACCCACCTCTGCCGTCTTCCTGCTGCAGGTTTAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148570 True 383 lncRNA 0.52 2 20279288 20299830

Neighbor

gene id symbol gene type direction distance location
AMCG00018772 NA coding upstream 71834 20202428 ~ 20207454 (+)
AMCG00018773 NA coding upstream 82184 20189590 ~ 20197104 (+)
AMCG00018770 mlxip,LOC107702943 coding upstream 127562 20121209 ~ 20151726 (+)
AMCG00018767 NA coding upstream 160146 20111903 ~ 20119142 (+)
AMCG00018769 NA coding upstream 168101 20099063 ~ 20111187 (+)
AMCG00018774 NA coding downstream 11328 20311158 ~ 20312556 (+)
AMCG00018775 NA coding downstream 22588 20322418 ~ 20348942 (+)
AMCG00018784 NA coding downstream 83299 20383129 ~ 20398337 (+)
AMCG00018783 NA coding downstream 108243 20408073 ~ 20433655 (+)
AMCG00018789 NA coding downstream 158135 20457965 ~ 20463349 (+)
G118410 NA non-coding upstream 284959 19994126 ~ 19994329 (+)
G118304 NA non-coding upstream 700257 19576964 ~ 19579031 (+)
G118291 NA non-coding upstream 799332 19479691 ~ 19479956 (+)
G118290 wscd2,LOC107597274,LOC107743343,LOC107696066 non-coding upstream 805828 19467823 ~ 19473460 (+)
G118285 NA non-coding upstream 822305 19456142 ~ 19456983 (+)
G118572 NA non-coding downstream 2840 20302670 ~ 20302958 (+)
G118601 NA non-coding downstream 77458 20377288 ~ 20381442 (+)
G118608 NA non-coding downstream 139130 20438960 ~ 20443229 (+)
G118618 NA non-coding downstream 191031 20490861 ~ 20491106 (+)
G118620 NA non-coding downstream 199844 20499674 ~ 20500210 (+)
G118557 NA other upstream 18348 20259377 ~ 20260940 (+)
AMCG00018762 NA other upstream 304558 19971139 ~ 19974730 (+)
AMCG00018740 NA other upstream 797196 19373472 ~ 19482092 (+)
AMCG00018732 NA other upstream 1044937 19223168 ~ 19234351 (+)
AMCG00018717 trpv4,LOC106585668 other upstream 1370332 18894335 ~ 18908956 (+)
AMCG00018781 denr other downstream 72389 20372219 ~ 20374812 (+)
G118623 NA other downstream 214330 20514160 ~ 20514491 (+)
G118635 NA other downstream 292906 20592736 ~ 20593016 (+)
G118636 NA other downstream 293536 20593366 ~ 20594139 (+)
AMCG00018792 LOC106928543 other downstream 302126 20601956 ~ 20603315 (+)

Expression


Co-expression Network