G118621 (LOC107554528,LOC107654556)


Basic Information

Item Value
gene id G118621
gene name LOC107554528,LOC107654556
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 20500950 ~ 20501433 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU148642
CTGGACAGGAAGGCCTGGTGCTGTTTGATGGTGTCCAGCTCGTAGGTGGACGAGTCGCTCCTCTTGCGGGGCAGCTGTTTCTTGGGGTCATCGGCGCCGCTGCGAGGGATGTCGATGTTGCTGCGGCTGAGGTGCCGGCTTCCCTCCAGGTTGGAACTGCTGGAGCAGTAGCTGTTGTTGACGATGATGCCCGGAGAGAGCAGGTCATTGTCCTGGAAGTGAGAAGAGCCAACAAGGCAAATGTACACAGCACCTTACCGCACCAGTGACATGTCGAAATGCCTTACAAACCGAAACTAAAACCTCCCAATGACCAGGAGCTGGAAACCAAGGCAACGAGGAAGGTGATTAATGAAAGTGTGTGAACATGACATACTTATGGAGTTTTCAAAAACTAGTTACATACATAATAGAATTCTAAAATTACAGAGAGCATTGGGTGCATACAATCGACAAATCAAGGCAGATATGAGCggaaacagat

Function

NR:

description
PREDICTED: membrane-associated phosphatidylinositol transfer protein 2-like isoform X7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148642 True 484 lncRNA 0.50 1 20500950 20501433

Neighbor

gene id symbol gene type direction distance location
AMCG00018782 arl6ip4 coding upstream 16021 20477126 ~ 20484929 (+)
AMCG00018789 NA coding upstream 37601 20457965 ~ 20463349 (+)
AMCG00018783 NA coding upstream 67295 20408073 ~ 20433655 (+)
AMCG00018784 NA coding upstream 102613 20383129 ~ 20398337 (+)
AMCG00018775 NA coding upstream 152008 20322418 ~ 20348942 (+)
AMCG00018793 kmt5a coding downstream 129570 20631003 ~ 20637704 (+)
AMCG00018791 snrnp35,LOC102792111 coding downstream 140896 20642329 ~ 20645241 (+)
AMCG00018799 tmed2,LOC105026094,LOC108425203 coding downstream 169403 20670836 ~ 20678821 (+)
AMCG00018804 NA coding downstream 194249 20695682 ~ 20697892 (+)
AMCG00018803 NA coding downstream 196789 20698222 ~ 20705953 (+)
G118620 NA non-coding upstream 740 20499674 ~ 20500210 (+)
G118618 NA non-coding upstream 9844 20490861 ~ 20491106 (+)
G118608 NA non-coding upstream 57721 20438960 ~ 20443229 (+)
G118601 NA non-coding upstream 119508 20377288 ~ 20381442 (+)
G118572 NA non-coding upstream 197992 20302670 ~ 20302958 (+)
G118622 NA non-coding downstream 2683 20504116 ~ 20504507 (+)
G118624 pitpnm2 non-coding downstream 15826 20517259 ~ 20517494 (+)
G118625 pitpnm2 non-coding downstream 22005 20523438 ~ 20523721 (+)
G118626 NA non-coding downstream 35301 20536734 ~ 20576007 (+)
G118630 NA non-coding downstream 84195 20585628 ~ 20590502 (+)
AMCG00018781 denr other upstream 126138 20372219 ~ 20374812 (+)
G118557 NA other upstream 240010 20259377 ~ 20260940 (+)
AMCG00018762 NA other upstream 526220 19971139 ~ 19974730 (+)
AMCG00018740 NA other upstream 1018858 19373472 ~ 19482092 (+)
AMCG00018732 NA other upstream 1266599 19223168 ~ 19234351 (+)
G118623 NA other downstream 12727 20514160 ~ 20514491 (+)
G118635 NA other downstream 91303 20592736 ~ 20593016 (+)
G118636 NA other downstream 91933 20593366 ~ 20594139 (+)
AMCG00018792 LOC106928543 other downstream 100523 20601956 ~ 20603315 (+)
AMCG00018800 ddx55,gtf2h3,eif2b1 other downstream 177847 20679280 ~ 20695194 (+)

Expression


Co-expression Network