Gene
RNA
| Item | Value |
|---|---|
| gene id | G118622 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 20504116 ~ 20504507 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU148643 | True | 392 | lncRNA | 0.61 | 1 | 20504116 | 20504507 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00018782 | arl6ip4 | coding | upstream | 19187 | 20477126 ~ 20484929 (+) |
| AMCG00018789 | NA | coding | upstream | 40767 | 20457965 ~ 20463349 (+) |
| AMCG00018783 | NA | coding | upstream | 70461 | 20408073 ~ 20433655 (+) |
| AMCG00018784 | NA | coding | upstream | 105779 | 20383129 ~ 20398337 (+) |
| AMCG00018775 | NA | coding | upstream | 155174 | 20322418 ~ 20348942 (+) |
| AMCG00018793 | kmt5a | coding | downstream | 126496 | 20631003 ~ 20637704 (+) |
| AMCG00018791 | snrnp35,LOC102792111 | coding | downstream | 137822 | 20642329 ~ 20645241 (+) |
| AMCG00018799 | tmed2,LOC105026094,LOC108425203 | coding | downstream | 166329 | 20670836 ~ 20678821 (+) |
| AMCG00018804 | NA | coding | downstream | 191175 | 20695682 ~ 20697892 (+) |
| AMCG00018803 | NA | coding | downstream | 193715 | 20698222 ~ 20705953 (+) |
| G118621 | LOC107554528,LOC107654556 | non-coding | upstream | 2683 | 20500950 ~ 20501433 (+) |
| G118620 | NA | non-coding | upstream | 3906 | 20499674 ~ 20500210 (+) |
| G118618 | NA | non-coding | upstream | 13010 | 20490861 ~ 20491106 (+) |
| G118608 | NA | non-coding | upstream | 60887 | 20438960 ~ 20443229 (+) |
| G118601 | NA | non-coding | upstream | 122674 | 20377288 ~ 20381442 (+) |
| G118624 | pitpnm2 | non-coding | downstream | 12752 | 20517259 ~ 20517494 (+) |
| G118625 | pitpnm2 | non-coding | downstream | 18931 | 20523438 ~ 20523721 (+) |
| G118626 | NA | non-coding | downstream | 32227 | 20536734 ~ 20576007 (+) |
| G118630 | NA | non-coding | downstream | 81121 | 20585628 ~ 20590502 (+) |
| G118633 | NA | non-coding | downstream | 86056 | 20590563 ~ 20591175 (+) |
| AMCG00018781 | denr | other | upstream | 129304 | 20372219 ~ 20374812 (+) |
| G118557 | NA | other | upstream | 243176 | 20259377 ~ 20260940 (+) |
| AMCG00018762 | NA | other | upstream | 529386 | 19971139 ~ 19974730 (+) |
| AMCG00018740 | NA | other | upstream | 1022024 | 19373472 ~ 19482092 (+) |
| AMCG00018732 | NA | other | upstream | 1269765 | 19223168 ~ 19234351 (+) |
| G118623 | NA | other | downstream | 9653 | 20514160 ~ 20514491 (+) |
| G118635 | NA | other | downstream | 88229 | 20592736 ~ 20593016 (+) |
| G118636 | NA | other | downstream | 88859 | 20593366 ~ 20594139 (+) |
| AMCG00018792 | LOC106928543 | other | downstream | 97449 | 20601956 ~ 20603315 (+) |
| AMCG00018800 | ddx55,gtf2h3,eif2b1 | other | downstream | 174773 | 20679280 ~ 20695194 (+) |
