Gene
RNA
| Item | Value |
|---|---|
| gene id | G118626 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 20536734 ~ 20576007 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU148647 | True | 271 | lncRNA | 0.53 | 2 | 20536734 | 20576007 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00018782 | arl6ip4 | coding | upstream | 51805 | 20477126 ~ 20484929 (+) |
| AMCG00018789 | NA | coding | upstream | 73385 | 20457965 ~ 20463349 (+) |
| AMCG00018783 | NA | coding | upstream | 103079 | 20408073 ~ 20433655 (+) |
| AMCG00018784 | NA | coding | upstream | 138397 | 20383129 ~ 20398337 (+) |
| AMCG00018775 | NA | coding | upstream | 187792 | 20322418 ~ 20348942 (+) |
| AMCG00018793 | kmt5a | coding | downstream | 54996 | 20631003 ~ 20637704 (+) |
| AMCG00018791 | snrnp35,LOC102792111 | coding | downstream | 66322 | 20642329 ~ 20645241 (+) |
| AMCG00018799 | tmed2,LOC105026094,LOC108425203 | coding | downstream | 94829 | 20670836 ~ 20678821 (+) |
| AMCG00018804 | NA | coding | downstream | 119675 | 20695682 ~ 20697892 (+) |
| AMCG00018803 | NA | coding | downstream | 122215 | 20698222 ~ 20705953 (+) |
| G118625 | pitpnm2 | non-coding | upstream | 13013 | 20523438 ~ 20523721 (+) |
| G118624 | pitpnm2 | non-coding | upstream | 19240 | 20517259 ~ 20517494 (+) |
| G118622 | NA | non-coding | upstream | 32227 | 20504116 ~ 20504507 (+) |
| G118621 | LOC107554528,LOC107654556 | non-coding | upstream | 35301 | 20500950 ~ 20501433 (+) |
| G118620 | NA | non-coding | upstream | 36524 | 20499674 ~ 20500210 (+) |
| G118630 | NA | non-coding | downstream | 9621 | 20585628 ~ 20590502 (+) |
| G118633 | NA | non-coding | downstream | 14556 | 20590563 ~ 20591175 (+) |
| G118631 | NA | non-coding | downstream | 15186 | 20591193 ~ 20591550 (+) |
| G118632 | NA | non-coding | downstream | 15678 | 20591685 ~ 20591925 (+) |
| G118634 | NA | non-coding | downstream | 16068 | 20592075 ~ 20592422 (+) |
| G118623 | NA | other | upstream | 22243 | 20514160 ~ 20514491 (+) |
| AMCG00018781 | denr | other | upstream | 161922 | 20372219 ~ 20374812 (+) |
| G118557 | NA | other | upstream | 275794 | 20259377 ~ 20260940 (+) |
| AMCG00018762 | NA | other | upstream | 562004 | 19971139 ~ 19974730 (+) |
| AMCG00018740 | NA | other | upstream | 1054642 | 19373472 ~ 19482092 (+) |
| G118635 | NA | other | downstream | 16729 | 20592736 ~ 20593016 (+) |
| G118636 | NA | other | downstream | 17359 | 20593366 ~ 20594139 (+) |
| AMCG00018792 | LOC106928543 | other | downstream | 25949 | 20601956 ~ 20603315 (+) |
| AMCG00018800 | ddx55,gtf2h3,eif2b1 | other | downstream | 103273 | 20679280 ~ 20695194 (+) |
| AMCG00018802 | dnah10,LOC102798403,LOC105907537,LOC105907538 | other | downstream | 147603 | 20723610 ~ 20772586 (+) |
