G118631



Basic Information


Item Value
gene id G118631
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 20591193 ~ 20591550 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU148652
AATTTTTAGTATCAAATTCATATCAAtataaagggggaaaaaatccaaattttgatcatttttgtcagttttattgTACTCATTCTAGTCATCTATACAACTGGCAAGGATGCAACACTTAAACAAGGTGGTGGGGTTTCTTGGGGACAGGTGAATGTTGTTAAAATAAGTGCGAGTAGCCCCGTTCATACTTGAGTTGCCGATGAtgtcagatttccttaaagctcGGCCTTCGGTGCCTTTCGTCTCATCCAGCTCAATCAGGGCCTTCATCACCGGGGTCAGGGGACTGTCCCTCTTCCCCGCCTCCTTCGCTGCAGAGCTGTCTGTCTGGGCCGTGTCCGTCTCTGGAGGTGAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU148652 True 358 lncRNA 0.46 1 20591193 20591550

Neighbor


gene id symbol gene type direction distance location
AMCG00018782 arl6ip4 coding upstream 106264 20477126 ~ 20484929 (+)
AMCG00018789 NA coding upstream 127844 20457965 ~ 20463349 (+)
AMCG00018783 NA coding upstream 157538 20408073 ~ 20433655 (+)
AMCG00018784 NA coding upstream 192856 20383129 ~ 20398337 (+)
AMCG00018775 NA coding upstream 242251 20322418 ~ 20348942 (+)
AMCG00018793 kmt5a coding downstream 39453 20631003 ~ 20637704 (+)
AMCG00018791 snrnp35,LOC102792111 coding downstream 50779 20642329 ~ 20645241 (+)
AMCG00018799 tmed2,LOC105026094,LOC108425203 coding downstream 79286 20670836 ~ 20678821 (+)
AMCG00018804 NA coding downstream 104132 20695682 ~ 20697892 (+)
AMCG00018803 NA coding downstream 106672 20698222 ~ 20705953 (+)
G118633 NA non-coding upstream 18 20590563 ~ 20591175 (+)
G118630 NA non-coding upstream 691 20585628 ~ 20590502 (+)
G118626 NA non-coding upstream 15186 20536734 ~ 20576007 (+)
G118625 pitpnm2 non-coding upstream 67472 20523438 ~ 20523721 (+)
G118624 pitpnm2 non-coding upstream 73699 20517259 ~ 20517494 (+)
G118632 NA non-coding downstream 135 20591685 ~ 20591925 (+)
G118634 NA non-coding downstream 525 20592075 ~ 20592422 (+)
G118637 NA non-coding downstream 3623 20595173 ~ 20595580 (+)
G118638 NA non-coding downstream 4918 20596468 ~ 20596692 (+)
G118639 NA non-coding downstream 5551 20597101 ~ 20597607 (+)
G118623 NA other upstream 76702 20514160 ~ 20514491 (+)
AMCG00018781 denr other upstream 216381 20372219 ~ 20374812 (+)
G118557 NA other upstream 330253 20259377 ~ 20260940 (+)
AMCG00018762 NA other upstream 616463 19971139 ~ 19974730 (+)
AMCG00018740 NA other upstream 1109101 19373472 ~ 19482092 (+)
G118635 NA other downstream 1186 20592736 ~ 20593016 (+)
G118636 NA other downstream 1816 20593366 ~ 20594139 (+)
AMCG00018792 LOC106928543 other downstream 10406 20601956 ~ 20603315 (+)
AMCG00018800 ddx55,gtf2h3,eif2b1 other downstream 87730 20679280 ~ 20695194 (+)
AMCG00018802 dnah10,LOC102798403,LOC105907537,LOC105907538 other downstream 132060 20723610 ~ 20772586 (+)

Expression



Co-expression Network