G118637


Basic Information

Item Value
gene id G118637
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 20595173 ~ 20595580 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU148658
cacatttctgcaggCTACGGTAGAAGTGTCCCAGACTCGACCTGAGATTGAAACATTACAGCCTGGACTGCTAGATTGTAAGGTCACTATGTTGACAggggtttagttttgttttcttacctGAAGCTTCAGACCCCAGGGAGACAGGACTGTCATTTTGCTTTCTTAGGTAGAAGGAGTGAGAGGACTGTGCTGCAGAGCATGACTGagactgaaattaaatcaacacggacagttttttttttttttaattcttgttaTTAAAGATATCAGAAAGATTATTTTCACAGAAGTACCCAATTCTGATCCTTCCCCAAAACACTGAAGGTGAATACAAGTAGGCTTTGCACATACGATTCTGTGCGATTCATATCTAGGGTGGTATTTGGGACACAAACCAGGCTCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148658 True 408 lncRNA 0.41 1 20595173 20595580

Neighbor

gene id symbol gene type direction distance location
AMCG00018782 arl6ip4 coding upstream 110244 20477126 ~ 20484929 (+)
AMCG00018789 NA coding upstream 131824 20457965 ~ 20463349 (+)
AMCG00018783 NA coding upstream 161518 20408073 ~ 20433655 (+)
AMCG00018784 NA coding upstream 196836 20383129 ~ 20398337 (+)
AMCG00018775 NA coding upstream 246231 20322418 ~ 20348942 (+)
AMCG00018793 kmt5a coding downstream 35423 20631003 ~ 20637704 (+)
AMCG00018791 snrnp35,LOC102792111 coding downstream 46749 20642329 ~ 20645241 (+)
AMCG00018799 tmed2,LOC105026094,LOC108425203 coding downstream 75256 20670836 ~ 20678821 (+)
AMCG00018804 NA coding downstream 100102 20695682 ~ 20697892 (+)
AMCG00018803 NA coding downstream 102642 20698222 ~ 20705953 (+)
G118634 NA non-coding upstream 2751 20592075 ~ 20592422 (+)
G118632 NA non-coding upstream 3248 20591685 ~ 20591925 (+)
G118631 NA non-coding upstream 3623 20591193 ~ 20591550 (+)
G118633 NA non-coding upstream 3998 20590563 ~ 20591175 (+)
G118630 NA non-coding upstream 4671 20585628 ~ 20590502 (+)
G118638 NA non-coding downstream 888 20596468 ~ 20596692 (+)
G118639 NA non-coding downstream 1521 20597101 ~ 20597607 (+)
G118640 NA non-coding downstream 2295 20597875 ~ 20598118 (+)
G118641 NA non-coding downstream 4211 20599791 ~ 20600356 (+)
G118645 NA non-coding downstream 9124 20604704 ~ 20606097 (+)
G118636 NA other upstream 1034 20593366 ~ 20594139 (+)
G118635 NA other upstream 2157 20592736 ~ 20593016 (+)
G118623 NA other upstream 80682 20514160 ~ 20514491 (+)
AMCG00018781 denr other upstream 220361 20372219 ~ 20374812 (+)
G118557 NA other upstream 334233 20259377 ~ 20260940 (+)
AMCG00018792 LOC106928543 other downstream 6376 20601956 ~ 20603315 (+)
AMCG00018800 ddx55,gtf2h3,eif2b1 other downstream 83700 20679280 ~ 20695194 (+)
AMCG00018802 dnah10,LOC102798403,LOC105907537,LOC105907538 other downstream 128030 20723610 ~ 20772586 (+)
G118815 NA other downstream 592376 21187956 ~ 21189246 (+)
AMCG00018820 NA other downstream 1252790 21848370 ~ 21897700 (+)

Expression


Co-expression Network