G118638


Basic Information

Item Value
gene id G118638
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 20596468 ~ 20596692 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU148659
CACCCCCACATCTTGATATCTCCAGAGGTATCTTGTGCTGTTATATGTAGGAGGCTATGGCTAAAGGTCACATACTTCGTCCGGTGTGTCCGCATGTGCTTCTGGACTCCCGACAGAGCTCCGGCCTGACCGCTGCTCTGACCGAGAGCCCTGGGCCACTCTGCTCTTCTGCAGCTTCCGAGTCTGCTTCTGCGCCCAGGAAGTCAACGGCTGACTGAGATGAAT

Function

NR:

description
S-phase kinase-associated protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148659 True 225 lncRNA 0.56 1 20596468 20596692

Neighbor

gene id symbol gene type direction distance location
AMCG00018782 arl6ip4 coding upstream 111539 20477126 ~ 20484929 (+)
AMCG00018789 NA coding upstream 133119 20457965 ~ 20463349 (+)
AMCG00018783 NA coding upstream 162813 20408073 ~ 20433655 (+)
AMCG00018784 NA coding upstream 198131 20383129 ~ 20398337 (+)
AMCG00018775 NA coding upstream 247526 20322418 ~ 20348942 (+)
AMCG00018793 kmt5a coding downstream 34311 20631003 ~ 20637704 (+)
AMCG00018791 snrnp35,LOC102792111 coding downstream 45637 20642329 ~ 20645241 (+)
AMCG00018799 tmed2,LOC105026094,LOC108425203 coding downstream 74144 20670836 ~ 20678821 (+)
AMCG00018804 NA coding downstream 98990 20695682 ~ 20697892 (+)
AMCG00018803 NA coding downstream 101530 20698222 ~ 20705953 (+)
G118637 NA non-coding upstream 888 20595173 ~ 20595580 (+)
G118634 NA non-coding upstream 4046 20592075 ~ 20592422 (+)
G118632 NA non-coding upstream 4543 20591685 ~ 20591925 (+)
G118631 NA non-coding upstream 4918 20591193 ~ 20591550 (+)
G118633 NA non-coding upstream 5293 20590563 ~ 20591175 (+)
G118639 NA non-coding downstream 409 20597101 ~ 20597607 (+)
G118640 NA non-coding downstream 1183 20597875 ~ 20598118 (+)
G118641 NA non-coding downstream 3099 20599791 ~ 20600356 (+)
G118645 NA non-coding downstream 8012 20604704 ~ 20606097 (+)
G118644 NA non-coding downstream 10956 20607648 ~ 20620547 (+)
G118636 NA other upstream 2329 20593366 ~ 20594139 (+)
G118635 NA other upstream 3452 20592736 ~ 20593016 (+)
G118623 NA other upstream 81977 20514160 ~ 20514491 (+)
AMCG00018781 denr other upstream 221656 20372219 ~ 20374812 (+)
G118557 NA other upstream 335528 20259377 ~ 20260940 (+)
AMCG00018792 LOC106928543 other downstream 5264 20601956 ~ 20603315 (+)
AMCG00018800 ddx55,gtf2h3,eif2b1 other downstream 82588 20679280 ~ 20695194 (+)
AMCG00018802 dnah10,LOC102798403,LOC105907537,LOC105907538 other downstream 126918 20723610 ~ 20772586 (+)
G118815 NA other downstream 591264 21187956 ~ 21189246 (+)
AMCG00018820 NA other downstream 1251678 21848370 ~ 21897700 (+)

Expression


Co-expression Network