G118640


Basic Information

Item Value
gene id G118640
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 20597875 ~ 20598118 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU148661
CTGAATCTGACACTGATATTGCTCGTGCTGGGCAAGGATTTGATCCTGGTACTGCTTCTCCACCAACTGGAAAAGCTGCAGCCATCTGCCCTGTTTATGACAGAAGTTTGAATGTAACAATGTGAAATTGGCAATAACGTCGGACAATATTACCTCTGCACTGTGCCGCCTTCCTATACTGAAACCCTTGAGCATGGAGTACAAACAGCAGACATGCGTGTTGTTCTGCTGGGGCTTATCAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148661 True 244 lncRNA 0.47 1 20597875 20598118

Neighbor

gene id symbol gene type direction distance location
AMCG00018782 arl6ip4 coding upstream 112946 20477126 ~ 20484929 (+)
AMCG00018789 NA coding upstream 134526 20457965 ~ 20463349 (+)
AMCG00018783 NA coding upstream 164220 20408073 ~ 20433655 (+)
AMCG00018784 NA coding upstream 199538 20383129 ~ 20398337 (+)
AMCG00018775 NA coding upstream 248933 20322418 ~ 20348942 (+)
AMCG00018793 kmt5a coding downstream 32885 20631003 ~ 20637704 (+)
AMCG00018791 snrnp35,LOC102792111 coding downstream 44211 20642329 ~ 20645241 (+)
AMCG00018799 tmed2,LOC105026094,LOC108425203 coding downstream 72718 20670836 ~ 20678821 (+)
AMCG00018804 NA coding downstream 97564 20695682 ~ 20697892 (+)
AMCG00018803 NA coding downstream 100104 20698222 ~ 20705953 (+)
G118639 NA non-coding upstream 268 20597101 ~ 20597607 (+)
G118638 NA non-coding upstream 1183 20596468 ~ 20596692 (+)
G118637 NA non-coding upstream 2295 20595173 ~ 20595580 (+)
G118634 NA non-coding upstream 5453 20592075 ~ 20592422 (+)
G118632 NA non-coding upstream 5950 20591685 ~ 20591925 (+)
G118641 NA non-coding downstream 1673 20599791 ~ 20600356 (+)
G118645 NA non-coding downstream 6586 20604704 ~ 20606097 (+)
G118644 NA non-coding downstream 9530 20607648 ~ 20620547 (+)
G118771 NA non-coding downstream 324250 20922368 ~ 20931404 (+)
G118863 NA non-coding downstream 772792 21370910 ~ 21422770 (+)
G118636 NA other upstream 3736 20593366 ~ 20594139 (+)
G118635 NA other upstream 4859 20592736 ~ 20593016 (+)
G118623 NA other upstream 83384 20514160 ~ 20514491 (+)
AMCG00018781 denr other upstream 223063 20372219 ~ 20374812 (+)
G118557 NA other upstream 336935 20259377 ~ 20260940 (+)
AMCG00018792 LOC106928543 other downstream 3838 20601956 ~ 20603315 (+)
AMCG00018800 ddx55,gtf2h3,eif2b1 other downstream 81162 20679280 ~ 20695194 (+)
AMCG00018802 dnah10,LOC102798403,LOC105907537,LOC105907538 other downstream 125492 20723610 ~ 20772586 (+)
G118815 NA other downstream 589838 21187956 ~ 21189246 (+)
AMCG00018820 NA other downstream 1250252 21848370 ~ 21897700 (+)

Expression


Co-expression Network