G118692


Basic Information

Item Value
gene id G118692
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 20482884 ~ 20485106 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU148726
taatattatactacaaaaaaagtatttttaaacatttctattttactAGGCCTATAATCCTACAAATATTACAGACcgggtttttattttgttttattcgtTTCAATTTCACAGATAATGaatcattattaatttgaataatagcGTGTGGGTGTTGATAGAAAACAATATCACAGCAAATTATCAACGGGAGACTATTTCTTCCCTCAGTGACTATTTCAGCTGAAGTTTGCTACACGTGACCAGATGTAGAACAATTCTCTTTATATTTGACGTGCTAATATCAGTAGAAATCAAGTGTCCGTTGGGATCATTACGCAGTACTTGTAAGCAGGGGGGTTCCAGAGCAGTACATTTTCAGACTCGTTCATTCGCAGTAGCTCTTCTAGATCAGGTTCTTCAGCTTTGCTGCTGTAAATCTTAGTTACAGAAGCCTTACATTTCCTTCTGTTGTTTTACATCCATGAAAATATTGATGAATTTGACAaacttttgtatgtttgttatattttatttatagggAAACGTTACATATGGACATAgatgaatataaaaatgaaaatagtaataagtggaaaaaaaaaaacatcctttccTAGGCACACCAATTATAACATCAACTAACGAAATCTGTTGTTTCCAAATTCAATCTGCTGCTTAACAGTTTTgatttcctgtatttatttcaagtgTGTAAAGCTAATGTTTTCGACCTGTTCAAATCGTGTGTAACACTCACACCTGCATATTTCTTCTTTCCTGGCTGTTAGTGCAATGTTCTGATGCCTGGGTGTGCTTTGTGTACAGTATCATTGTACGTAATGTGGATTAAAAGACAATTGGACCGCTGTTTTATTCTTTCCCTGTGTTTTATGTacagtgtataaataaatattaagaacgggagaacaaaacaaaaaaaatcactccCACATGACGGAGAATTTTTTCTGCATTCTTCCACTGCTTCTTGTAAATTACTAATAAAGATTCCTGTCTGCCAGTTAATAGATTCTTCATCTGTACTAAATCGGGAGATTAAGAGTTATTGGCTCAGCAGGTGCTGTGGGATTTTTGGTTGAAGTAGGACCCTCCAGCTATCAGACCAGGGTTGGGAgatgaaaatggaaatataaCTAACAGCGACTCCAGAGCCTGTGAAGGTTTTCCTGCTTCACACTCCACACTGTGTGGTTTGCACGTAAGGTTTGAAATTGGGAGGCCACTAATGTGGGATCCTGACGGTGAATCCAAGAGACGAGACCCGGGCCGGGGAAGATCGGAGGGGCTGGGAGCAGGATGTTCATCTCCTTCAAGGCCAGAGATGGGTGGAGATGGTGAATGTCCATTATTGCTACATTAGCGCTTGAGCCCTGATCTCTTCTGGAAGGCGTGTCCGTCGCCTATGGTTGCTTGCTTGTTgatctctctgtgtttgtctctgcTCACAATTTCCTCCAGtatctctccttctcccctcaCGAGCCTGAgatcaacacaaaaacaacagcccATTTAAATACGAAGAACAACACTTGACAATTAAACGCTGGCTTTAGCAGTGTAGATGGCGCCACCAAATGTAAATTCTGTCATAAAGAGTTTCGCCGTTGCTGCTGTACCTGGTCCTGCCTGTCTCAGGGTCGACAACCCTGCGGATCACACTCTGCTTGGCGTCCCACTCCTCCTTGGTCATGGGCCTCTTGGTAGAGATCCGGGCCTTCTGCTCATCGGTCATCACTGTGGAGAGATGGCTGGGTTAATGCCACAGTCTCCTTCTTATCATTTACCCAACCCAATCTGCAGATTCTCCCCCCCCTGCCGGCTCCTCCCCCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148726 True 1837 lncRNA 0.41 2 20482884 20485106

Neighbor

gene id symbol gene type direction distance location
AMCG00018785 NA coding downstream 6355 20471539 ~ 20476529 (-)
AMCG00018787 NA coding downstream 16841 20458955 ~ 20466043 (-)
AMCG00018786 denr coding downstream 101617 20377025 ~ 20381267 (-)
AMCG00018776 NA coding downstream 119948 20349576 ~ 20362936 (-)
AMCG00018779 rsrc2,LOC106585280 coding downstream 161253 20313185 ~ 20321631 (-)
AMCG00018795 mphosph9 coding upstream 102483 20587589 ~ 20601750 (-)
AMCG00018796 sbno1 coding upstream 123789 20608895 ~ 20624686 (-)
AMCG00018798 NA coding upstream 152604 20637710 ~ 20641876 (-)
AMCG00018808 NA coding upstream 291813 20776919 ~ 20805326 (-)
AMCG00018807 ncor2 coding upstream 437267 20922373 ~ 21012691 (-)
G118536 NA non-coding downstream 265705 20214770 ~ 20217179 (-)
G118518 NA non-coding downstream 314553 20168118 ~ 20168331 (-)
G118515 NA non-coding downstream 329897 20152727 ~ 20152987 (-)
G118502 NA non-coding downstream 358396 20116451 ~ 20124488 (-)
G118479 NA non-coding downstream 401221 20081388 ~ 20081663 (-)
G118696 NA non-coding upstream 121722 20606828 ~ 20607086 (-)
G118715 NA non-coding upstream 194174 20679280 ~ 20679555 (-)
G118716 NA non-coding upstream 195504 20680610 ~ 20681038 (-)
G118717 NA non-coding upstream 196018 20681124 ~ 20681365 (-)
G118718 NA non-coding upstream 196437 20681543 ~ 20681784 (-)
AMCG00018788 LOC107579725 other downstream 24267 20438959 ~ 20458617 (-)
G118477 NA other downstream 403002 20078088 ~ 20079882 (-)
G118434 NA other downstream 494716 19987674 ~ 19988168 (-)
AMCG00018742 wscd2,LOC106584983,LOC105898177 other downstream 983905 19467768 ~ 19498979 (-)
AMCG00018723 NA other downstream 1435167 19038557 ~ 19047717 (-)
AMCG00018790 LOC101483632,LOC102787753,LOC106585272,LOC107722332,LOC107554528 other upstream 3829 20488935 ~ 20523819 (-)
AMCG00018794 cdk2ap1,LOC105905088,LOC105026112,LOC108438487 other upstream 118389 20603495 ~ 20606743 (-)
AMCG00018797 NA other upstream 159779 20644885 ~ 20678437 (-)
AMCG00018805 eif2b1,LOC106580370,LOC106585290 other upstream 198560 20683666 ~ 20689922 (-)
G118727 NA other upstream 211728 20696834 ~ 20697827 (-)

Expression


Co-expression Network