G118727


Basic Information

Item Value
gene id G118727
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 20696834 ~ 20697827 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU148773
CAGATAATATACAGTGCTATGTGCAGGAATAATGTTAAAACAgaggcacaaacacacatggagtagtagtattttattaacaaagcGAGCTGCAGTCACTTCATGCTCTCGGACAGTTTATTGAGCTCCTGGGAGAGAGCGGTCACAGTGTCTAGGatcctccctctctcgctgTCCTCCAGCCGGGCCCCGCAGCGCTGGGCGAACTTGTCCGGGTGCCAGAGTGTCTGCTGTCTCTTCAGCAGCTTGCGGAAAGCGGTCTTGTCCTTGCGGTCGGCCCCATGCAGCATCACCTCCACCATCTCCCGCACCGAGCCCTGCGGCGCCGGCCAGGGGATGTCCGAGTAGCCCAGCCTGGAGTCCGACCCTCCCTGGAAAGTGGCAGCGCACTTCTCCTCATATCTCTGCTTCTTCCCTAACCGAACCTCCTCTGCCTTCCTCGCGGCTCGGGCCAAGTACTCGGCATGCTCTGCTTCCAGTCTGGCTTGGAGCTCTTTGTGGCTTTCGGCCTCCTgctccttcttcttcctcttcctcccgcTCACGGAGCCCTCTGCCTCTCTTTGGGCCTGGGCGCGCCGCTTCTCATGGTACTCCCGCCTGATCTGCTCAGCCCAGTCCACAAAATCATCTGGCTCCGCATCCTCCCTGGAGAGATTGTCATACTGTCCAAACGTCTCGAAGAACTCATCCTGGCATTCTCCGAAAAGCTTTTCTCGCCACTCCTTTTCAGGGTCTGTTTTTGTAGTGCCGTCTCCTGCCATTGTTGCATCCTGGAA
>TU148774
CAGATAATATACAGTGCTATGTGCAGGAATAATGTTAAAACAgaggcacaaacacacatggagtagtagtattttattaacaaagcGAGCTGCAGTCACTTCATGCTCTCGGACAGTTTATTGAGCTCCTGGGAGAGAGCGGTCACAGTGTCTAGGatcctccctctctcgctgTCCTCCAGCCGGGCCCCGCAGCGCTGGGCGAACTTGTCCGGGTGCCAGAGTGTCTGCTGTCTCTTCAGCAGCTTGCGGAAAGCGGTCTTGTCCTTGCGGTCGGCCCCATGCAGCATCACCTCCACCATCTCCCGCACCGAGCCCTGCGGCGCCGGCCAGGGGATGTCCGAGTAGCCCAGCCTGGAGTCCGACCCTCCCTGGAAAGTGGCAGCGCACTTCTCCTCATATCTCTGCTTCTTCCCTAACCGAACCTCCTCTGCCTTCCTCGCGGCTCGGGCCAAGTACTCGGCATGCTCTGCTTCCAGTCTGGCTTGGAGCTCTTTGTGGCTTTCGGCCTCCTgctccttcttcttcctcttcctcccgcTCACGGAGCCCTCTGCCTCTCTTTGGGCCTGGGCGCGCCGCTTCTCATGGTACTCCCGCCTGATCTGCTCAGCCCAGTCCACAAAATCATCTGGCTCCGCATCCTCCCTGGAGAGATCATCTGATtTGTCATACTGTCCAAACGTCTCGAAGAACTCATCCTGGCATTCTCCGAAAAGCTTTTCTCGCCACTCCTTTTCAGGGTCTGTTTTTGTAGTGCCGTCTCCTGCCATTGTTGCATCCTGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148773 False 779 TUCP 0.57 2 20696834 20697827
TU148774 True 788 lncRNA 0.56 2 20696834 20697827

Neighbor

gene id symbol gene type direction distance location
AMCG00018798 NA coding downstream 54958 20637710 ~ 20641876 (-)
AMCG00018796 sbno1 coding downstream 72148 20608895 ~ 20624686 (-)
AMCG00018795 mphosph9 coding downstream 95084 20587589 ~ 20601750 (-)
AMCG00018785 NA coding downstream 220305 20471539 ~ 20476529 (-)
AMCG00018787 NA coding downstream 230791 20458955 ~ 20466043 (-)
AMCG00018808 NA coding upstream 79092 20776919 ~ 20805326 (-)
AMCG00018807 ncor2 coding upstream 224546 20922373 ~ 21012691 (-)
AMCG00018810 NA coding upstream 444228 21142055 ~ 21146883 (-)
AMCG00018809 NA coding upstream 450705 21148532 ~ 21175765 (-)
AMCG00018811 NA coding upstream 479005 21176832 ~ 21180489 (-)
G118726 NA non-coding downstream 646 20695669 ~ 20696188 (-)
G118720 NA non-coding downstream 13480 20682954 ~ 20683354 (-)
G118719 NA non-coding downstream 14543 20682079 ~ 20682291 (-)
G118718 NA non-coding downstream 15050 20681543 ~ 20681784 (-)
G118717 NA non-coding downstream 15469 20681124 ~ 20681365 (-)
G118735 NA non-coding upstream 25753 20723580 ~ 20723781 (-)
G118808 NA non-coding upstream 410743 21108570 ~ 21108801 (-)
G118870 NA non-coding upstream 869182 21567009 ~ 21567253 (-)
G118881 adgrd1,LOC107659615,LOC107726205,LOC107684517,LOC107553828 non-coding upstream 897167 21594994 ~ 21616493 (-)
G118886 NA non-coding upstream 983506 21681333 ~ 21681557 (-)
AMCG00018805 eif2b1,LOC106580370,LOC106585290 other downstream 6912 20683666 ~ 20689922 (-)
AMCG00018797 NA other downstream 18397 20644885 ~ 20678437 (-)
AMCG00018794 cdk2ap1,LOC105905088,LOC105026112,LOC108438487 other downstream 90091 20603495 ~ 20606743 (-)
AMCG00018790 LOC101483632,LOC102787753,LOC106585272,LOC107722332,LOC107554528 other downstream 173015 20488935 ~ 20523819 (-)
AMCG00018788 LOC107579725 other downstream 238217 20438959 ~ 20458617 (-)
G118936 NA other upstream 1382637 22080464 ~ 22113695 (-)
G119144 NA other upstream 2106518 22804345 ~ 22806338 (-)
AMCG00018898 NA other upstream 4377571 25075398 ~ 25084586 (-)
G119538 LOC108444117,LOC105014832,LOC106563153 other upstream 4436944 25134771 ~ 25171644 (-)
G119545 NA other upstream 4488380 25186207 ~ 25187408 (-)

Expression


Co-expression Network