G118808


Basic Information

Item Value
gene id G118808
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 21108570 ~ 21108801 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU148874
gagacttcctacatcctggacggtgaaagctaagtgctgtcaagatgtagggttacagacgagggctacgggaaagggagcaaggaggaaaacaatcaagaatgcgaggagcataataagctgaagtgctatctagcagggatagaggactaatattacaagtgctgttggaagagatgcgtcttgagtaagcgccggaatgaggtcaagggctctgctgttttgacttcgg

Function

GO:

id name namespace
GO:0030031 cell projection assembly biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148874 True 232 lncRNA 0.48 1 21108570 21108801

Neighbor

gene id symbol gene type direction distance location
AMCG00018807 ncor2 coding downstream 95879 20922373 ~ 21012691 (-)
AMCG00018808 NA coding downstream 303244 20776919 ~ 20805326 (-)
AMCG00018798 NA coding downstream 466694 20637710 ~ 20641876 (-)
AMCG00018796 sbno1 coding downstream 483884 20608895 ~ 20624686 (-)
AMCG00018795 mphosph9 coding downstream 506820 20587589 ~ 20601750 (-)
AMCG00018810 NA coding upstream 33254 21142055 ~ 21146883 (-)
AMCG00018809 NA coding upstream 39731 21148532 ~ 21175765 (-)
AMCG00018811 NA coding upstream 68031 21176832 ~ 21180489 (-)
AMCG00018813 NA coding upstream 77580 21186381 ~ 21190099 (-)
AMCG00018812 NA coding upstream 84146 21192947 ~ 21228267 (-)
G118735 NA non-coding downstream 384789 20723580 ~ 20723781 (-)
G118726 NA non-coding downstream 412382 20695669 ~ 20696188 (-)
G118720 NA non-coding downstream 425216 20682954 ~ 20683354 (-)
G118719 NA non-coding downstream 426279 20682079 ~ 20682291 (-)
G118718 NA non-coding downstream 426786 20681543 ~ 20681784 (-)
G118870 NA non-coding upstream 458208 21567009 ~ 21567253 (-)
G118881 adgrd1,LOC107659615,LOC107726205,LOC107684517,LOC107553828 non-coding upstream 486193 21594994 ~ 21616493 (-)
G118886 NA non-coding upstream 572532 21681333 ~ 21681557 (-)
G118889 NA non-coding upstream 586182 21694983 ~ 21702048 (-)
G118892 NA non-coding upstream 594501 21703302 ~ 21718803 (-)
G118727 NA other downstream 410743 20696834 ~ 20697827 (-)
AMCG00018805 eif2b1,LOC106580370,LOC106585290 other downstream 418648 20683666 ~ 20689922 (-)
AMCG00018797 NA other downstream 430133 20644885 ~ 20678437 (-)
AMCG00018794 cdk2ap1,LOC105905088,LOC105026112,LOC108438487 other downstream 501827 20603495 ~ 20606743 (-)
AMCG00018790 LOC101483632,LOC102787753,LOC106585272,LOC107722332,LOC107554528 other downstream 584751 20488935 ~ 20523819 (-)
G118936 NA other upstream 971663 22080464 ~ 22113695 (-)
G119144 NA other upstream 1695544 22804345 ~ 22806338 (-)
AMCG00018898 NA other upstream 3966597 25075398 ~ 25084586 (-)
G119538 LOC108444117,LOC105014832,LOC106563153 other upstream 4025970 25134771 ~ 25171644 (-)
G119545 NA other upstream 4077406 25186207 ~ 25187408 (-)

Expression


Co-expression Network