G118815



Basic Information


Item Value
gene id G118815
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 21187956 ~ 21189246 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU148883
tatatatatatacacatacacacacacatacacatacatagcttatcattaaaatatacaccAACCTTGcaacaataaagaaatattaGATGCACAACATAGTACAGTCAGCtttgttttttgccttttttctgtaGCATTCTTTATACCTATAAAGCAATAAATACTAATTTACAGAACTTATATACAAGCTATATAGTAAGGTTAAGATAAAATATATGCTTAAAGGTGATGGCAaaagaaatgttttgtatatttatttatttgtttatttatatttataagcaCAGTAGCAAATTCTTCAAGTATTATGacaaaatatacattggttTGGTGAACTGTAAACCACTTACCacttgtgtgtgttggtgtgagCATTCTTCTTACATTCATTTATCTACAGCCACAGTGGCAGGGAAAATACCAGGCATGATTCATGCGCCATCcactgcagtgcagtataaGGTTGTAGAACATCTATTGGCAAATTTAACACTGCCACTAAACAACACAAGGTGCTCCAACAATTTCTGTTGTGAACCAAAACTGCAAacgattttttatttttgtacacatACATGGCATTCAGCTTTTTCAATGTTGACATTTTACCAAACGCAATTTGAGCCAAATTGGTGCATTTCTTGTTGCAGTTTTTGATTTGGCTGTTTGATATTGTGGCGTTTAGGGATAAATTTGCCCTGCTCTCTgtgacacacacaagcacacacactccACCACTTTCATATTTACCTCTATCTCAATGTAAAAAACACAGCCTTTTTACATCCAAACTCACAACGCTACACAATTATTCCACCCAGATTTGGCTGCTGTttactgaacaacaacaaaaaaacaaaacaaaacaaaacaaaaaagatgcactCCATAGAAATACAAAGGTActtgtaaaaaaagaaaccaaaaaaaacctgCAATTTACACATTTAGATAAATTTAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU148883 True 964 TUCP 0.33 2 21187956 21189246
Loading

Neighbor


gene id symbol gene type direction distance location
AMCG00018806 rflna,LOC106585519 coding upstream 275879 20896914 ~ 20912077 (+)
AMCG00018801 atp6v0a2,LOC106580324,LOC106584979 coding upstream 464842 20706497 ~ 20723114 (+)
AMCG00018803 NA coding upstream 482003 20698222 ~ 20705953 (+)
AMCG00018804 NA coding upstream 490064 20695682 ~ 20697892 (+)
AMCG00018799 tmed2,LOC105026094,LOC108425203 coding upstream 509135 20670836 ~ 20678821 (+)
AMCG00018823 NA coding downstream 502065 21691311 ~ 21692108 (+)
AMCG00018821 NA coding downstream 526604 21715850 ~ 21743739 (+)
AMCG00018826 NA coding downstream 840954 22030200 ~ 22036605 (+)
AMCG00018825 NA coding downstream 858056 22047302 ~ 22074621 (+)
AMCG00018828 NA coding downstream 901457 22090703 ~ 22091323 (+)
G118771 NA non-coding upstream 256552 20922368 ~ 20931404 (+)
G118644 NA non-coding upstream 567409 20607648 ~ 20620547 (+)
G118645 NA non-coding upstream 581859 20604704 ~ 20606097 (+)
G118641 NA non-coding upstream 587600 20599791 ~ 20600356 (+)
G118640 NA non-coding upstream 589838 20597875 ~ 20598118 (+)
G118863 NA non-coding downstream 181664 21370910 ~ 21422770 (+)
G118885 NA non-coding downstream 492074 21681320 ~ 21681723 (+)
G118999 NA non-coding downstream 1358026 22547272 ~ 22547691 (+)
G119005 NA non-coding downstream 1368967 22558213 ~ 22558419 (+)
G119006 NA non-coding downstream 1371816 22561062 ~ 22561280 (+)
AMCG00018802 dnah10,LOC102798403,LOC105907537,LOC105907538 other upstream 415370 20723610 ~ 20772586 (+)
AMCG00018800 ddx55,gtf2h3,eif2b1 other upstream 492762 20679280 ~ 20695194 (+)
AMCG00018792 LOC106928543 other upstream 584641 20601956 ~ 20603315 (+)
G118636 NA other upstream 593817 20593366 ~ 20594139 (+)
G118635 NA other upstream 594940 20592736 ~ 20593016 (+)
AMCG00018820 NA other downstream 659124 21848370 ~ 21897700 (+)
G119507 NA other downstream 4044836 25234082 ~ 25267781 (+)
AMCG00018913 NA other downstream 4276845 25466091 ~ 25485446 (+)
AMCG00018922 med13l other downstream 4489431 25678677 ~ 25718426 (+)
G119762 NA other downstream 5271374 26460620 ~ 26461227 (+)

Expression


G118815 Expression in all Baseline Samples

Bar chart with 16 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 100.
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G118815 Expression in each Bioproject

Bar chart with 7 bars.
G118815 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
End of interactive chart.

Co-expression Network