G118870


Basic Information

Item Value
gene id G118870
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 21567009 ~ 21567253 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU148977
ctcacaggcgtaccccaaggctccgtcctgggccccctcctgttctctctctacactcgctccctgggccccctcatcgcttcccatggtttctcctaccacttctatgctgatgatgcccaggtcttcctgtcttttccctcttctgaccctctcatcccctctcgcatctcttcctgtttgtctgctatctccgcctggatgcactcgcaccacctcaagctcaacctctccaaatcggatct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148977 True 245 lncRNA 0.57 1 21567009 21567253

Neighbor

gene id symbol gene type direction distance location
AMCG00018815 sfswap,LOC104965082 coding downstream 144357 21401894 ~ 21422652 (-)
AMCG00018816 mmp17,LOC106563158,LOC107661370 coding downstream 300599 21239907 ~ 21266410 (-)
AMCG00018812 NA coding downstream 338742 21192947 ~ 21228267 (-)
AMCG00018813 NA coding downstream 376910 21186381 ~ 21190099 (-)
AMCG00018811 NA coding downstream 386520 21176832 ~ 21180489 (-)
AMCG00018819 NA coding upstream 30216 21597469 ~ 21600672 (-)
AMCG00018814 adgrd1 coding upstream 44697 21611950 ~ 21623551 (-)
AMCG00018817 NA coding upstream 81581 21648834 ~ 21666684 (-)
AMCG00018818 LOC107665254 coding upstream 105021 21672274 ~ 21675196 (-)
AMCG00018822 NA coding upstream 330553 21897806 ~ 21909489 (-)
G118808 NA non-coding downstream 458208 21108570 ~ 21108801 (-)
G118735 NA non-coding downstream 843228 20723580 ~ 20723781 (-)
G118726 NA non-coding downstream 870821 20695669 ~ 20696188 (-)
G118720 NA non-coding downstream 883655 20682954 ~ 20683354 (-)
G118719 NA non-coding downstream 884718 20682079 ~ 20682291 (-)
G118881 adgrd1,LOC107659615,LOC107726205,LOC107684517,LOC107553828 non-coding upstream 27741 21594994 ~ 21616493 (-)
G118886 NA non-coding upstream 114080 21681333 ~ 21681557 (-)
G118889 NA non-coding upstream 127730 21694983 ~ 21702048 (-)
G118892 NA non-coding upstream 136049 21703302 ~ 21718803 (-)
G118947 NA non-coding upstream 584101 22151354 ~ 22153714 (-)
G118727 NA other downstream 869182 20696834 ~ 20697827 (-)
AMCG00018805 eif2b1,LOC106580370,LOC106585290 other downstream 877087 20683666 ~ 20689922 (-)
AMCG00018797 NA other downstream 888572 20644885 ~ 20678437 (-)
AMCG00018794 cdk2ap1,LOC105905088,LOC105026112,LOC108438487 other downstream 960266 20603495 ~ 20606743 (-)
AMCG00018790 LOC101483632,LOC102787753,LOC106585272,LOC107722332,LOC107554528 other downstream 1043190 20488935 ~ 20523819 (-)
G118936 NA other upstream 513211 22080464 ~ 22113695 (-)
G119144 NA other upstream 1237092 22804345 ~ 22806338 (-)
AMCG00018898 NA other upstream 3508145 25075398 ~ 25084586 (-)
G119538 LOC108444117,LOC105014832,LOC106563153 other upstream 3567518 25134771 ~ 25171644 (-)
G119545 NA other upstream 3618954 25186207 ~ 25187408 (-)

Expression


Co-expression Network