G118885


Basic Information

Item Value
gene id G118885
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 21681320 ~ 21681723 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU149002
gtgttttgtgtttagagttttggGAAAATGAGCCAAAGATTCAGCAAACGTGTAgacaattgggaaaaactgtaatattacatttttaatatgtacattataaggaatacaggtatgtgacacctatcaaatgaaaatggacaaactgtactataattTTCTGCATCGTTGATCATGATcatacaaactatattacactactaccaagtattttttcacaaaaacagaaatgtgttttttgaaattaaaatgtttgaccttttcctccattaaagtgtAATGAACATTTTGAGATGAAAATTcatgttgaaataccactcaaacTGAAATTTGTGTTGTTGGGTGAAATAAcctaagaaatgaaggaataatgtgcaattGGAATAACGGAAAAATAACGGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU149002 True 404 lncRNA 0.30 1 21681320 21681723

Neighbor

gene id symbol gene type direction distance location
AMCG00018806 rflna,LOC106585519 coding upstream 769243 20896914 ~ 20912077 (+)
AMCG00018801 atp6v0a2,LOC106580324,LOC106584979 coding upstream 958206 20706497 ~ 20723114 (+)
AMCG00018803 NA coding upstream 975367 20698222 ~ 20705953 (+)
AMCG00018804 NA coding upstream 983428 20695682 ~ 20697892 (+)
AMCG00018799 tmed2,LOC105026094,LOC108425203 coding upstream 1002499 20670836 ~ 20678821 (+)
AMCG00018823 NA coding downstream 9588 21691311 ~ 21692108 (+)
AMCG00018821 NA coding downstream 34127 21715850 ~ 21743739 (+)
AMCG00018826 NA coding downstream 348477 22030200 ~ 22036605 (+)
AMCG00018825 NA coding downstream 365579 22047302 ~ 22074621 (+)
AMCG00018828 NA coding downstream 408980 22090703 ~ 22091323 (+)
G118863 NA non-coding upstream 258550 21370910 ~ 21422770 (+)
G118771 NA non-coding upstream 749916 20922368 ~ 20931404 (+)
G118644 NA non-coding upstream 1060773 20607648 ~ 20620547 (+)
G118645 NA non-coding upstream 1075223 20604704 ~ 20606097 (+)
G118641 NA non-coding upstream 1080964 20599791 ~ 20600356 (+)
G118999 NA non-coding downstream 865549 22547272 ~ 22547691 (+)
G119005 NA non-coding downstream 876490 22558213 ~ 22558419 (+)
G119006 NA non-coding downstream 879339 22561062 ~ 22561280 (+)
G119007 NA non-coding downstream 880829 22562552 ~ 22562810 (+)
G119008 NA non-coding downstream 882647 22564370 ~ 22564707 (+)
G118815 NA other upstream 492074 21187956 ~ 21189246 (+)
AMCG00018802 dnah10,LOC102798403,LOC105907537,LOC105907538 other upstream 908734 20723610 ~ 20772586 (+)
AMCG00018800 ddx55,gtf2h3,eif2b1 other upstream 986126 20679280 ~ 20695194 (+)
AMCG00018792 LOC106928543 other upstream 1078005 20601956 ~ 20603315 (+)
G118636 NA other upstream 1087181 20593366 ~ 20594139 (+)
AMCG00018820 NA other downstream 166647 21848370 ~ 21897700 (+)
G119507 NA other downstream 3552359 25234082 ~ 25267781 (+)
AMCG00018913 NA other downstream 3784368 25466091 ~ 25485446 (+)
AMCG00018922 med13l other downstream 3996954 25678677 ~ 25718426 (+)
G119762 NA other downstream 4778897 26460620 ~ 26461227 (+)

Expression


Co-expression Network