G118892


Basic Information

Item Value
gene id G118892
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 21703302 ~ 21718803 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU149015
TCTGGCATTACAGTAAAAAGCCTTCCAGTAATCTCTCAAATAAAATTACTGAAATGAGTGCAATATGTCAGATTGCACAACATTTCAGATATTCCGCGAATCTATTTTAGACACAGGAAGTAGAAAAACATGAACATCACTCAATACAACCTTCCAATTAGActgatgaaaaaagaaaaagttacacataaagaataaaatgCTACTTTGGGTGTTGAGGTCCATCCTCTCGTGTTTCACACCAATAGAGGTGCTATTAAATTCAATGTGTGGGACACCGCAGGACAAGAGAAGTTTGGGGGTCTTTGTGATTACATTCAAGG

Function

NR:

description
PREDICTED: zinc finger CCCH domain-containing protein 13

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU149015 True 323 lncRNA 0.37 2 21703302 21718803

Neighbor

gene id symbol gene type direction distance location
AMCG00018818 LOC107665254 coding downstream 28106 21672274 ~ 21675196 (-)
AMCG00018817 NA coding downstream 36618 21648834 ~ 21666684 (-)
AMCG00018814 adgrd1 coding downstream 79751 21611950 ~ 21623551 (-)
AMCG00018819 NA coding downstream 102630 21597469 ~ 21600672 (-)
AMCG00018815 sfswap,LOC104965082 coding downstream 280650 21401894 ~ 21422652 (-)
AMCG00018822 NA coding upstream 179003 21897806 ~ 21909489 (-)
AMCG00018824 fzd10,LOC108441898,LOC103024082,LOC107669258,LOC107659609,LOC107574912 coding upstream 234431 21953234 ~ 21954948 (-)
AMCG00018830 NA coding upstream 458155 22176958 ~ 22223700 (-)
AMCG00018831 NA coding upstream 573178 22291981 ~ 22292847 (-)
AMCG00018835 med15 coding upstream 704603 22423406 ~ 22438354 (-)
G118889 NA non-coding downstream 1254 21694983 ~ 21702048 (-)
G118886 NA non-coding downstream 21745 21681333 ~ 21681557 (-)
G118881 adgrd1,LOC107659615,LOC107726205,LOC107684517,LOC107553828 non-coding downstream 86809 21594994 ~ 21616493 (-)
G118870 NA non-coding downstream 136049 21567009 ~ 21567253 (-)
G118808 NA non-coding downstream 594501 21108570 ~ 21108801 (-)
G118947 NA non-coding upstream 432551 22151354 ~ 22153714 (-)
G119048 NA non-coding upstream 908742 22627545 ~ 22630125 (-)
G119070 NA non-coding upstream 945030 22663833 ~ 22664099 (-)
G119072 NA non-coding upstream 948126 22666929 ~ 22667210 (-)
G119128 NA non-coding upstream 1043557 22762360 ~ 22766026 (-)
G118727 NA other downstream 1005475 20696834 ~ 20697827 (-)
AMCG00018805 eif2b1,LOC106580370,LOC106585290 other downstream 1013380 20683666 ~ 20689922 (-)
AMCG00018797 NA other downstream 1024865 20644885 ~ 20678437 (-)
AMCG00018794 cdk2ap1,LOC105905088,LOC105026112,LOC108438487 other downstream 1096559 20603495 ~ 20606743 (-)
AMCG00018790 LOC101483632,LOC102787753,LOC106585272,LOC107722332,LOC107554528 other downstream 1179483 20488935 ~ 20523819 (-)
G118936 NA other upstream 361661 22080464 ~ 22113695 (-)
G119144 NA other upstream 1085542 22804345 ~ 22806338 (-)
AMCG00018898 NA other upstream 3356595 25075398 ~ 25084586 (-)
G119538 LOC108444117,LOC105014832,LOC106563153 other upstream 3415968 25134771 ~ 25171644 (-)
G119545 NA other upstream 3467404 25186207 ~ 25187408 (-)

Expression


Co-expression Network