G118999


Basic Information

Item Value
gene id G118999
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 22547272 ~ 22547691 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU149148
GCTGGGGCCGCTGCTGAGAAGAGTGGGGGCTGTGACTCACCTGGTGGGTCTTGCTGTTGATGTAGAGGAAGGCCAGACGGTACAGGCTCTTGTAGTGCTGAGGGAAGCGGCTGAGGCAGAGGAAGAGGGCTCGGGTGCACATGTCCACCAGCACGCGCCGCTGCTCTGCATGATCCGCCGGCAGACTCTGGGGCACTTCCGTTGTCTCCCCTGTACCCTCCAGCTTCTTTCTGGCCTCTCCAGTCGGGGTCATGGGGTTAGACAGAGAGGGGGCCTTGGTTGGGGTCATCGGGACTACTGGCAGCGCAGGGTCAGTGGGAGGCTTTTGACCCGCAATTTCCGCCAGTGATAGCGATAGGGTGTCCAGCACATCCTGGAGAACCTCAGCTTCCCTTCTCTCACTCTTCTCTTCTGGCACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU149148 True 420 lncRNA 0.61 1 22547272 22547691

Neighbor

gene id symbol gene type direction distance location
AMCG00018832 crkl,LOC106566436,LOC106563168 coding upstream 86855 22455239 ~ 22460417 (+)
AMCG00018833 NA coding upstream 97943 22440803 ~ 22449329 (+)
AMCG00018834 NA coding upstream 124458 22401501 ~ 22422814 (+)
AMCG00018827 NA coding upstream 408979 22115610 ~ 22138293 (+)
AMCG00018829 NA coding upstream 455654 22091346 ~ 22091618 (+)
AMCG00018836 NA coding downstream 56660 22604351 ~ 22627498 (+)
AMCG00018838 derl3,derl2,LOC107667536,LOC107602852,LOC105014174 coding downstream 82854 22630545 ~ 22636051 (+)
AMCG00018837 NA coding downstream 103448 22651139 ~ 22659793 (+)
AMCG00018847 NA coding downstream 137186 22684877 ~ 22692816 (+)
AMCG00018845 NA coding downstream 164001 22711692 ~ 22719425 (+)
G118885 NA non-coding upstream 865549 21681320 ~ 21681723 (+)
G118863 NA non-coding upstream 1124502 21370910 ~ 21422770 (+)
G118771 NA non-coding upstream 1615868 20922368 ~ 20931404 (+)
G118644 NA non-coding upstream 1926725 20607648 ~ 20620547 (+)
G118645 NA non-coding upstream 1941175 20604704 ~ 20606097 (+)
G119005 NA non-coding downstream 10522 22558213 ~ 22558419 (+)
G119006 NA non-coding downstream 13371 22561062 ~ 22561280 (+)
G119007 NA non-coding downstream 14861 22562552 ~ 22562810 (+)
G119008 NA non-coding downstream 16679 22564370 ~ 22564707 (+)
G119009 cabin1 non-coding downstream 17667 22565358 ~ 22565611 (+)
AMCG00018820 NA other upstream 649572 21848370 ~ 21897700 (+)
G118815 NA other upstream 1358026 21187956 ~ 21189246 (+)
AMCG00018802 dnah10,LOC102798403,LOC105907537,LOC105907538 other upstream 1774686 20723610 ~ 20772586 (+)
AMCG00018800 ddx55,gtf2h3,eif2b1 other upstream 1852078 20679280 ~ 20695194 (+)
AMCG00018792 LOC106928543 other upstream 1943957 20601956 ~ 20603315 (+)
G119507 NA other downstream 2686391 25234082 ~ 25267781 (+)
AMCG00018913 NA other downstream 2918400 25466091 ~ 25485446 (+)
AMCG00018922 med13l other downstream 3130986 25678677 ~ 25718426 (+)
G119762 NA other downstream 3912929 26460620 ~ 26461227 (+)

Expression


Co-expression Network