G119006


Basic Information

Item Value
gene id G119006
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 22561062 ~ 22561280 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU149155
CATCAGCCAGggcctgctcctgctcctgctggcGCTCCTGccgctcctgctgctgctgctgctgctgacggGAGCTTTTACGTTTCACGTAATCGTGGTCAACCGGTGTGGCTGTGTAAGGTGGGGATGTCAGACCTGGCCCagtggaggggagggaggtCCCGGGACCCTGCGCCGTGCCCATGGAGGAGTGTGAGTCCTCATCAATCACAGACGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU149155 True 219 lncRNA 0.63 1 22561062 22561280

Neighbor

gene id symbol gene type direction distance location
AMCG00018832 crkl,LOC106566436,LOC106563168 coding upstream 100645 22455239 ~ 22460417 (+)
AMCG00018833 NA coding upstream 111733 22440803 ~ 22449329 (+)
AMCG00018834 NA coding upstream 138248 22401501 ~ 22422814 (+)
AMCG00018827 NA coding upstream 422769 22115610 ~ 22138293 (+)
AMCG00018829 NA coding upstream 469444 22091346 ~ 22091618 (+)
AMCG00018836 NA coding downstream 43071 22604351 ~ 22627498 (+)
AMCG00018838 derl3,derl2,LOC107667536,LOC107602852,LOC105014174 coding downstream 69265 22630545 ~ 22636051 (+)
AMCG00018837 NA coding downstream 89859 22651139 ~ 22659793 (+)
AMCG00018847 NA coding downstream 123597 22684877 ~ 22692816 (+)
AMCG00018845 NA coding downstream 150412 22711692 ~ 22719425 (+)
G119005 NA non-coding upstream 2643 22558213 ~ 22558419 (+)
G118999 NA non-coding upstream 13371 22547272 ~ 22547691 (+)
G118885 NA non-coding upstream 879339 21681320 ~ 21681723 (+)
G118863 NA non-coding upstream 1138292 21370910 ~ 21422770 (+)
G118771 NA non-coding upstream 1629658 20922368 ~ 20931404 (+)
G119007 NA non-coding downstream 1272 22562552 ~ 22562810 (+)
G119008 NA non-coding downstream 3090 22564370 ~ 22564707 (+)
G119009 cabin1 non-coding downstream 4078 22565358 ~ 22565611 (+)
G119010 NA non-coding downstream 6486 22567766 ~ 22567980 (+)
G119013 NA non-coding downstream 14179 22575459 ~ 22575690 (+)
AMCG00018820 NA other upstream 663362 21848370 ~ 21897700 (+)
G118815 NA other upstream 1371816 21187956 ~ 21189246 (+)
AMCG00018802 dnah10,LOC102798403,LOC105907537,LOC105907538 other upstream 1788476 20723610 ~ 20772586 (+)
AMCG00018800 ddx55,gtf2h3,eif2b1 other upstream 1865868 20679280 ~ 20695194 (+)
AMCG00018792 LOC106928543 other upstream 1957747 20601956 ~ 20603315 (+)
G119507 NA other downstream 2672802 25234082 ~ 25267781 (+)
AMCG00018913 NA other downstream 2904811 25466091 ~ 25485446 (+)
AMCG00018922 med13l other downstream 3117397 25678677 ~ 25718426 (+)
G119762 NA other downstream 3899340 26460620 ~ 26461227 (+)

Expression


Co-expression Network