G119070


Basic Information

Item Value
gene id G119070
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 22663833 ~ 22664099 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU149241
AAAGGGACTacagagattttaattttgaatgttgtgcCTAATGTAGAGaactgtgtgtagtgttttgcaaaaagtgTGATATAGAATTGGAAACTGAGTGTAAAGCAGGAATTGTGCTTGCAATTTTGCAGACTTGGATTAGGGATTTGGTACATGAGTTTCAGGTTCCGGTGATTGCGTTTCATGTTCCAATTTTAGTGTGTAAAgaattgggaaaaactgtaaaatgcaatacatgttctgtgatgtgcactattcaaatgtttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU149241 True 267 lncRNA 0.36 1 22663833 22664099

Neighbor

gene id symbol gene type direction distance location
AMCG00018844 smarcb1,LOC107661349 coding downstream 18466 22637693 ~ 22645367 (-)
AMCG00018843 NA coding downstream 73509 22588552 ~ 22590324 (-)
AMCG00018842 NA coding downstream 77797 22584167 ~ 22586036 (-)
AMCG00018841 NA coding downstream 80994 22561021 ~ 22582839 (-)
AMCG00018839 NA coding downstream 126514 22498019 ~ 22537319 (-)
AMCG00018856 NA coding upstream 89868 22753967 ~ 22760428 (-)
AMCG00018861 NA coding upstream 103362 22767461 ~ 22768061 (-)
AMCG00018859 NA coding upstream 107337 22771436 ~ 22790973 (-)
AMCG00018860 NA coding upstream 145386 22809485 ~ 22821646 (-)
AMCG00018857 NA coding upstream 175433 22839532 ~ 22850722 (-)
G119048 NA non-coding downstream 33708 22627545 ~ 22630125 (-)
G118947 NA non-coding downstream 510119 22151354 ~ 22153714 (-)
G118892 NA non-coding downstream 945030 21703302 ~ 21718803 (-)
G118889 NA non-coding downstream 961785 21694983 ~ 21702048 (-)
G118886 NA non-coding downstream 982276 21681333 ~ 21681557 (-)
G119072 NA non-coding upstream 2830 22666929 ~ 22667210 (-)
G119128 NA non-coding upstream 98261 22762360 ~ 22766026 (-)
G119129 NA non-coding upstream 170660 22834759 ~ 22857679 (-)
G119180 NA non-coding upstream 318767 22982866 ~ 22983566 (-)
G119181 NA non-coding upstream 320085 22984184 ~ 22984772 (-)
G118936 NA other downstream 550138 22080464 ~ 22113695 (-)
G118727 NA other downstream 1966006 20696834 ~ 20697827 (-)
AMCG00018805 eif2b1,LOC106580370,LOC106585290 other downstream 1973911 20683666 ~ 20689922 (-)
AMCG00018797 NA other downstream 1985396 20644885 ~ 20678437 (-)
AMCG00018794 cdk2ap1,LOC105905088,LOC105026112,LOC108438487 other downstream 2057090 20603495 ~ 20606743 (-)
G119144 NA other upstream 140246 22804345 ~ 22806338 (-)
AMCG00018898 NA other upstream 2411299 25075398 ~ 25084586 (-)
G119538 LOC108444117,LOC105014832,LOC106563153 other upstream 2470672 25134771 ~ 25171644 (-)
G119545 NA other upstream 2522108 25186207 ~ 25187408 (-)
AMCG00018929 NA other upstream 3787625 26451724 ~ 26485315 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G1573265 NA non-coding NC_048582.1 CM023236.2 64297256 ~ 64297741 (-)