G119128


Basic Information

Item Value
gene id G119128
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 22762360 ~ 22766026 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU149317
tccagtgtttttgttttttattagtgCTTGAGCAAGTAAACTGGTCACTTCAACAGTGTTAATCCTAGAGGAAGGATTGTTATTTTAAGATTGTTACAGGGTAGTAAGCATTACAGGCGGGGTAATACTACAGGGCCTGTGGAGGAATCCTGTGTATTGGTCCTTCAGCCAAAGGTTGAGTTGTTCCAGCCCACGTTCTCTGCTTCCATGTCAACAAAGTTAATATAGATCCTCTGCCTGGATGCCCATGTGCTTTTTGAGGAGTCCAGACAGCAGCTGGGAATACTGCTTGTTCTGCGATCCACTGATCTTCCCAATACTGTGCAGGGAGCACAGAGCACAAGGGTCTGGCTTTCCACCAAACATCATTATCTGATCAGCGTTGACCTGCACTGCAATGTACTGCAGGTTTCCCCATTGCTTTAGCCAAGTCCTTGGTGGCCTCTGACAGAAAAGCGTCAGGGACGGCGTCTTTGTCCACATTGGTATTGACCACGAACATCGGCATCTTGGCTTCTTTGGAGAGGCAGAGGATGAGAGACACGTTCAGGCTGCTGCAGAGGACATCCGGGTATCTCCTACAGTGGCGGGGCAGACTGCTCTGTTGTCTCCGCCCTCCAATCACAGGCGCCTGCGTCAAGAGCATCTTTAGTCACCATAGCGTCCTCTAGCGACCCATACAGCTGGTGGGGTCACTATTTCCAAGATTTACAAGATATTtctcttttttggttttgtcaGACTTTGCTTGGTGCCTCGCTTTCTTCAGCTTTATAGTCAGTCGTCCCATTTGTAGGCTGGAGCTCACATGCTGTCCAGACCACAGAGAGATGAGGGGGGAGGTTAGCAATGGATGCAGGTTGGCTGTGGGAGGGTGGATGGAAGGACTGATGTGCCAGTGCCCTGTCCAGATGCCGAATATATTAAATtcattgttgcagcaagattgtgtaacccatgtatgaatttaagctttgcGTATTGCTCCGGAGAGGTcaggtgcagtagttctgtgtagcaGATTTTTAGAAACAAAGGAATTCATCCAAGGCcacagagagaacagaagacaaaggagaagtgtgtgataaagtttggggcaCCTCATTGCTGTCATGTAGTTGCCAGAAATCAAAGGGAGTCATCTtgtatatgatagtatgttctttagaaaaactttagatgtgtcGTCCCCACTGGCCATCTCTGGAGCACGTcattgtagctgaataaactatttggTATTATATTTGAGTTAAATCGGGACCTGGGTATTCTTTGTCTgcctatctattgagggagtacATATCTCCCTATCATGTCCATagtgtatttgattattttgtattgtggattgctgtttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU149317 True 1364 lncRNA 0.46 3 22762360 22766026

Neighbor

gene id symbol gene type direction distance location
AMCG00018856 NA coding downstream 1932 22753967 ~ 22760428 (-)
AMCG00018844 smarcb1,LOC107661349 coding downstream 116993 22637693 ~ 22645367 (-)
AMCG00018843 NA coding downstream 172036 22588552 ~ 22590324 (-)
AMCG00018842 NA coding downstream 176324 22584167 ~ 22586036 (-)
AMCG00018841 NA coding downstream 179521 22561021 ~ 22582839 (-)
AMCG00018861 NA coding upstream 1435 22767461 ~ 22768061 (-)
AMCG00018859 NA coding upstream 5410 22771436 ~ 22790973 (-)
AMCG00018860 NA coding upstream 43459 22809485 ~ 22821646 (-)
AMCG00018857 NA coding upstream 73506 22839532 ~ 22850722 (-)
AMCG00018855 snrpd3,LOC105014836 coding upstream 95065 22861091 ~ 22862779 (-)
G119072 NA non-coding downstream 95150 22666929 ~ 22667210 (-)
G119070 NA non-coding downstream 98261 22663833 ~ 22664099 (-)
G119048 NA non-coding downstream 132235 22627545 ~ 22630125 (-)
G118947 NA non-coding downstream 608646 22151354 ~ 22153714 (-)
G118892 NA non-coding downstream 1043557 21703302 ~ 21718803 (-)
G119129 NA non-coding upstream 68733 22834759 ~ 22857679 (-)
G119180 NA non-coding upstream 216840 22982866 ~ 22983566 (-)
G119181 NA non-coding upstream 218158 22984184 ~ 22984772 (-)
G119235 NA non-coding upstream 343575 23109601 ~ 23111520 (-)
G119382 NA non-coding upstream 1753387 24519413 ~ 24608462 (-)
G118936 NA other downstream 648665 22080464 ~ 22113695 (-)
G118727 NA other downstream 2064533 20696834 ~ 20697827 (-)
AMCG00018805 eif2b1,LOC106580370,LOC106585290 other downstream 2072438 20683666 ~ 20689922 (-)
AMCG00018797 NA other downstream 2083923 20644885 ~ 20678437 (-)
AMCG00018794 cdk2ap1,LOC105905088,LOC105026112,LOC108438487 other downstream 2155617 20603495 ~ 20606743 (-)
G119144 NA other upstream 38319 22804345 ~ 22806338 (-)
AMCG00018898 NA other upstream 2309372 25075398 ~ 25084586 (-)
G119538 LOC108444117,LOC105014832,LOC106563153 other upstream 2368745 25134771 ~ 25171644 (-)
G119545 NA other upstream 2420181 25186207 ~ 25187408 (-)
AMCG00018929 NA other upstream 3685698 26451724 ~ 26485315 (-)

Expression


Co-expression Network