G119129


Basic Information

Item Value
gene id G119129
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 22834759 ~ 22857679 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU149321
AATGCTTTTATTACAAAGAAAGGTCTTCACAGCAATCTTTACAAAAGCAATTGTAGGCTTGTGATAGATTGAAATGATAAAAGTTTATTAGCATATTTTGAGGGAATGAATCAGAGAAGAATGAAAcccattgaaatatatattattttttataggtGTTTCTCCTCTGTCCACTCTCTCCAAAAGTGAGATTGCTCCTATTGATCATCAGATTGCAAATACCGTACTTCATTCTATGTACCAAAAAGAGACCTGACCTCCTGGACTAAAAGCATTAACCTGAAAACACTACCCGCTGCATGGCCACATAGAAGAACCCAAGTATAAAAGCATGGGCAGACGCCGTGGGGCAAAAAGGGGCAACACTGTGCTTCAGTATTCTATACATATTGTATCTAgttgatcatttaaataaatttgcaGTTGCCTTCAGTTCCTGTGCTTCGTGTCAGTGTTTTACAAAAGCATTCAAATGATTATATCCTGGTGGAAACATTGCCATTTGTTGGGGTTGTGAACAAGGAAAGTAACATTTACAGTAGCGCTCAGGAGTGTATAAACTTTGACCAGGTGGTCCACTTTGGATTTTATAAACAGTGGCAGCATCTGGTTTTGAATCATTGGTCTCTAAAACCAACACATACCAACTTTTCTCAGAGTTTTGGTTATGGGGTCCCATATGTAGTTTGTGAATTTGCAACCTTAAAAAttgacaaaaaaggaaaagggaaatgAAATTAGAATAGGGGTTCTCCAAGGTATTAGCATTTTAATACAGTAGTCACAGTTTATATCTCAGTGCATGTTATAATAACtaagagagagagtggaaaaaaacctaaataaatgagTGTAATGGAGGAGTGAATTGAACTTCAGTTTCCAAATTCAGGCACAGCAGTTTAGCAGTCAGCGCTCCATGTCAAAAGGGAATTCTCCTGGACCCTTGAAGACAAGCCATCACTTTAAGGACGCGATCCACTTCCTGGATATTGGGGTCGGTTCTAATCAAAGGAAGACCTTTGATCCCCACTTACCAAGTCAAAGTCATCCacaaatttgtatttcttctctCTGTAGAAATTCCTTTTCTTCATACAGTACAAGACAATGCAATCACACAGCACCGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU149321 True 1131 lncRNA 0.38 2 22834759 22857679

Neighbor

gene id symbol gene type direction distance location
AMCG00018860 NA coding downstream 13113 22809485 ~ 22821646 (-)
AMCG00018859 NA coding downstream 43786 22771436 ~ 22790973 (-)
AMCG00018861 NA coding downstream 66698 22767461 ~ 22768061 (-)
AMCG00018856 NA coding downstream 74331 22753967 ~ 22760428 (-)
AMCG00018844 smarcb1,LOC107661349 coding downstream 189392 22637693 ~ 22645367 (-)
AMCG00018855 snrpd3,LOC105014836 coding upstream 3412 22861091 ~ 22862779 (-)
AMCG00018858 bup1,upb1 coding upstream 13480 22871159 ~ 22875760 (-)
AMCG00018863 NA coding upstream 18982 22876661 ~ 22887044 (-)
AMCG00018862 NA coding upstream 41873 22899552 ~ 22927435 (-)
AMCG00018867 ptpn11 coding upstream 129546 22987225 ~ 22993237 (-)
G119128 NA non-coding downstream 68733 22762360 ~ 22766026 (-)
G119072 NA non-coding downstream 167549 22666929 ~ 22667210 (-)
G119070 NA non-coding downstream 170660 22663833 ~ 22664099 (-)
G119048 NA non-coding downstream 204634 22627545 ~ 22630125 (-)
G118947 NA non-coding downstream 681045 22151354 ~ 22153714 (-)
G119180 NA non-coding upstream 125187 22982866 ~ 22983566 (-)
G119181 NA non-coding upstream 126505 22984184 ~ 22984772 (-)
G119235 NA non-coding upstream 251922 23109601 ~ 23111520 (-)
G119382 NA non-coding upstream 1661734 24519413 ~ 24608462 (-)
G119384 NA non-coding upstream 1708467 24566146 ~ 24568299 (-)
G119144 NA other downstream 28421 22804345 ~ 22806338 (-)
G118936 NA other downstream 721064 22080464 ~ 22113695 (-)
G118727 NA other downstream 2136932 20696834 ~ 20697827 (-)
AMCG00018805 eif2b1,LOC106580370,LOC106585290 other downstream 2144837 20683666 ~ 20689922 (-)
AMCG00018797 NA other downstream 2156322 20644885 ~ 20678437 (-)
AMCG00018898 NA other upstream 2217719 25075398 ~ 25084586 (-)
G119538 LOC108444117,LOC105014832,LOC106563153 other upstream 2277092 25134771 ~ 25171644 (-)
G119545 NA other upstream 2328528 25186207 ~ 25187408 (-)
AMCG00018929 NA other upstream 3594045 26451724 ~ 26485315 (-)
AMCG00018930 NA other upstream 3919956 26777635 ~ 26797720 (-)

Expression


Co-expression Network