G119234


Basic Information

Item Value
gene id G119234
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 23109601 ~ 23111520 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU149443
ttattattattattattattattattattataactgccCCCCAACAAGTTTCTCAAGGATTAGAGGGTCACTTGATTTTCATTCCATCCTGGGCTTAAAGTAACCTACTGAATTATTGTTTTGGCGGTCTAGGTAGAACAACCCTGAAATGTTTTCCTAGTTAGCACATTAAAGAACcaaaaaagacatttaatagGTATTATTTCCTGTGTAGAACTGGACCTGAAGGTGTAGATTATTGTACAATCTGCTTCCACACAGGACTTATTTTGCTTTGAAGCCTTGACAGGCAGCtttttcttaactttttttaCCAAGTGGCTACATGCATAAACATTAGACACAGCAAGCAGAATGGACTGCTCCCCTAAGCACCATGAAACGTATCAATGTGCTTTGTTGACCGGCTGATAGAGGGTGGCACTTTTCCCTGTCTGAGAAGCTGCTAGGATGGTGAACAGGATATTTGAGagtattgtttttatgatgGCTCCAGTTTCATTAATAAGGAAAAATGTATCATGAACCTGAGAGCAGGAAGATCAGTCTTGGGTCTGTGGATCACGCTGGAGTCTTCCTTTTTCAAACCTTACCATGTAACTGAGTTAATTTCAGCTGTCCTTGAGTTAATTTGAAGGAAGAGGCGACCTTTATATCATGGGGGAGACAGCTATAGGCCTGTTGGGCTGGTGACTTTAGGTGGTGTCTGCCTCCAAAGGGTACGACTGCCAGTGACCATACAGTTACAGCTCATGTTTAATTGTAACATTGTGTGTGCAGTGGAGTTGTACTTTTTATTAATAGTTAAAAAAGTANNNNNNNNNNCCCCCCCCCCCGGTGTTAGTAGTTCTGCTCTTTTGAGTCCATATGCctgttttcaatgtatttttaattatcagtAATTTATTATATGGaatgtgtccctgtgtctgatTGTACGGGTCTTGACTCATGCTCTGACACATCAGAAATACTcttgacaaacaaaacaccaagccCAGAATGGAGCAGACCCCAACACAGCATTGACTGGTAGCTGTGACAGGGCTCTGATTAAcctgtgttaaaaaaagactAGCTGGGAGaaggatacaaataataaaaaataaaaaatagagaAAATCCAATAGATGCATTTTTCAAAGCCCTTGCAGCCTGCTCAGATTATAATAGATTACGTatctttttttcttactttttcttctctctAAACCATAACAACAGTGCATTGGCATTGAGATTTAAAAGTCGTCACTTTAGGAATGGTGACCATCAATCTGCAGTACATATTCCATTTTCCTAATGTTGCATGAATCACATTCGCAAGAAAcgtattattttcttcagacGAGCTGGTTAGTGCTGTACAATGCTGCAGTACAATATATCTTTTATTGTCATCACGTTGGGAGGAAAGCCATTACAGTTTTATGATTTATCCACCCTGTAGCGCACGCCACATTATTTCTAggcttgtatttatttgaacagaATGCACAGTGACATTTggtgattttaaaatggcagtgcATTAAATCATAGTCAGATCACAAAACCCAAGAGTTCAGAAGGCTTCTTGGTTTCCATTCCATCTGTACTATAGATTACAGAAATGAATATATGACTAAATGAAGTCAGTCGAACACTGTAATTGAACAATGGTAATTTGAAACTTCAGACTTATGTATTGCACtctgattttaaaagcacatcCAGGGAAGACACTTTCCCCCTGCTGTAGACAAACATGTACCTGACTGCAATATTGATGGTATGAATGAAACTGCATATACTTCACCAGTGATTGTATCTGGATGAGcctttaacaaataaaattgttGTAAGACATCTGACACCATTACCTTGTCCATAGTACAGTTCAAACTGGCCATCTGTTCATTAAAATCTGTTTCCAGAAAA

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0007275 multicellular organism development biological_process
GO:0009653 anatomical structure morphogenesis biological_process
GO:0048856 anatomical structure development biological_process
GO:0032501 multicellular organismal process biological_process
GO:0032502 developmental process biological_process
GO:0046983 protein dimerization activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU149443 True 1920 lncRNA 0.38 1 23109601 23111520

Neighbor

gene id symbol gene type direction distance location
AMCG00018850 gucd1,LOC106585462 coding upstream 238828 22862980 ~ 22870773 (+)
AMCG00018853 NA coding upstream 274517 22820669 ~ 22835084 (+)
AMCG00018852 NA coding upstream 293738 22807605 ~ 22815863 (+)
AMCG00018854 NA coding upstream 302569 22800053 ~ 22807032 (+)
AMCG00018851 NA coding upstream 311236 22792277 ~ 22798365 (+)
AMCG00018876 NA coding downstream 1261120 24372640 ~ 24377928 (+)
AMCG00018886 selenom,selm,LOC103043669 coding downstream 1598154 24709674 ~ 24713528 (+)
AMCG00018899 NA coding downstream 1972656 25084176 ~ 25090285 (+)
AMCG00018897 LOC106585468,LOC104958862 coding downstream 1979611 25091131 ~ 25117419 (+)
AMCG00018908 NA coding downstream 2025067 25136587 ~ 25144798 (+)
G119231 NA non-coding upstream 1001 23094566 ~ 23108600 (+)
G119178 NA non-coding upstream 114411 22994976 ~ 22995190 (+)
G119177 NA non-coding upstream 126802 22979271 ~ 22982799 (+)
G119100 LOC106566253 non-coding upstream 247793 22765551 ~ 22861808 (+)
G119071 NA non-coding upstream 442460 22666892 ~ 22667141 (+)
G119272 pitpnb,LOC107396064,LOC107653151,LOC107704163,LOC107706770 non-coding downstream 783507 23895027 ~ 23928632 (+)
G119308 NA non-coding downstream 1246459 24357979 ~ 24367333 (+)
G119315 NA non-coding downstream 1275076 24386596 ~ 24425356 (+)
G119324 NA non-coding downstream 1347761 24459281 ~ 24522664 (+)
G119354 NA non-coding downstream 1426146 24537666 ~ 24599014 (+)
AMCG00018820 NA other upstream 1211901 21848370 ~ 21897700 (+)
G118815 NA other upstream 1920355 21187956 ~ 21189246 (+)
AMCG00018802 dnah10,LOC102798403,LOC105907537,LOC105907538 other upstream 2337015 20723610 ~ 20772586 (+)
AMCG00018800 ddx55,gtf2h3,eif2b1 other upstream 2414407 20679280 ~ 20695194 (+)
AMCG00018792 LOC106928543 other upstream 2506286 20601956 ~ 20603315 (+)
G119507 NA other downstream 2122562 25234082 ~ 25267781 (+)
AMCG00018913 NA other downstream 2354571 25466091 ~ 25485446 (+)
AMCG00018922 med13l other downstream 2567157 25678677 ~ 25718426 (+)
G119762 NA other downstream 3349100 26460620 ~ 26461227 (+)

Expression


Co-expression Network