G119600


Basic Information

Item Value
gene id G119600
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 25479010 ~ 25479524 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU149903
TGCACATACAAGGAAAATTTGTTTGCTGaatggagaaacaaaacaaaaaaatctatatcCCAGGCATTTATATGAAAATCCAGGCACTAATTGTTAGTCACCTTTTCTCCGAAGATCCTCTGGCAGATGCCGTTCTTGGCCAGCTTCTCCTTGACCTGCCGCGTGAGCTCGATGGTGTCCACCTCACGGTACATGTACATCTCGTACTGCTCCGGTGTGAGGGGCGGCACGGTGGGTTTGAGGGTGCGGGGCACGTAGGCAGGGTAGTACGAGAGGCGGCCGGTGGGGCCCTGGGCGTCACCGCTGCCTGAGGCGTCGGCCTCCACCTTCACCTCCAGGGGGCGCCCGGGCTCCTCCTCGGCGGCGGAGGCCTCCTCGCTGTTGGGCAGGCTCTCTCCGTTCTCGGGCCGGGGCCAGGGCCGGGGCAGGGCGGAGTagccggaggaggaggaggaggagagagaaggggagacgGAGGTGAACGGGCGGGTGCTGTTGCCGCCAGCAAGCCCGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU149903 True 515 lncRNA 0.62 1 25479010 25479524

Neighbor

gene id symbol gene type direction distance location
AMCG00018910 LOC108239856,LOC107385499,LOC103139559,LOC103366907 coding downstream 140957 25331301 ~ 25338053 (-)
AMCG00018911 ppp1cc,LOC107567955,LOC105902522,LOC108259981 coding downstream 163798 25303537 ~ 25315212 (-)
AMCG00018912 NA coding downstream 177308 25294104 ~ 25301702 (-)
AMCG00018907 pptc7,LOC107552188,LOC102794815,LOC107553043 coding downstream 193083 25266748 ~ 25285927 (-)
AMCG00018905 vps29 coding downstream 234730 25238897 ~ 25244280 (-)
AMCG00018916 NA coding upstream 9920 25489444 ~ 25533356 (-)
AMCG00018917 NA coding upstream 68018 25547542 ~ 25553092 (-)
AMCG00018920 NA coding upstream 117012 25596536 ~ 25600663 (-)
AMCG00018925 slc35e4 coding upstream 865106 26344630 ~ 26356608 (-)
AMCG00018926 NA coding upstream 887826 26367350 ~ 26410785 (-)
G119557 NA non-coding downstream 145835 25262362 ~ 25333175 (-)
G119466 NA non-coding downstream 433666 25044951 ~ 25045344 (-)
G119426 NA non-coding downstream 636889 24836787 ~ 24842121 (-)
G119382 NA non-coding downstream 870548 24519413 ~ 24608462 (-)
G119384 NA non-coding downstream 910711 24566146 ~ 24568299 (-)
G119615 NA non-coding upstream 92530 25572054 ~ 25578122 (-)
G119632 NA non-coding upstream 111048 25590572 ~ 25656954 (-)
G119637 NA non-coding upstream 125507 25605031 ~ 25606144 (-)
G119655 NA non-coding upstream 239062 25718586 ~ 25718976 (-)
G119672 tbx3,LOC106563287,LOC106566936,LOC107670392,LOC107566860,LOC107728866 non-coding upstream 540703 26020227 ~ 26068649 (-)
G119545 NA other downstream 291602 25186207 ~ 25187408 (-)
G119538 LOC108444117,LOC105014832,LOC106563153 other downstream 307366 25134771 ~ 25171644 (-)
AMCG00018898 NA other downstream 394424 25075398 ~ 25084586 (-)
G119144 NA other downstream 2672672 22804345 ~ 22806338 (-)
G118936 NA other downstream 3365315 22080464 ~ 22113695 (-)
AMCG00018929 NA other upstream 972200 26451724 ~ 26485315 (-)
AMCG00018930 NA other upstream 1298111 26777635 ~ 26797720 (-)
G119827 NA other upstream 1333956 26813480 ~ 26814073 (-)
G119893 LOC101154678 other upstream 1751349 27230873 ~ 27242574 (-)

Expression


Co-expression Network