G119632


Basic Information

Item Value
gene id G119632
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 25590572 ~ 25656954 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU149942
TTGTTTACAGTTTAAGAGTCTTTAATTGCTgacatacatatttcaaattggTTAACCACCAATTTCAGGCTGGTGGTAGCTTGTTACAGTAATCTATAACATCCACTGCACTGAATTCCTCCACTATGGAGGGAGATGTTGCATCCCTTTTCAGTCTAAGCCACATTAAAGCAAAACCTGCCCTCTAACAATGTtaaactactttttaaaatgcagcaggACTTCAAAACCAGACTACTGCTTGAACCTGGatcctaaacttttttttttttgtgacaatTGGTAAGTACTAAACAAAATGGTCAACTTGCATAGTGTCTGTATATGATGGTGCACAAACACATTGATGAAACAATGGCTAAATTGCAGACAAATTGTGGAAGGTAGGCTTACAAGTCTGGTTACagatttcaactttttttttttcccctaaagcATCAGTGACAGGGTGGTCTTCAGAGgtcttttaaataactgttCCCTGAATTTCTGGAAGGAAATTGCAAAGATTGTAAGGGTTACATCTAGAATGAGTTGCAAACAAAAAGAGGAATTTAACTTATTTCAATTAACCATAGTTATGGAAGAATAGCTGTAGCTGTAGATTAGGTGATGCAAATATTGCACTGCAGCAAAAACCTTGGCAAAATACCCTGATTAACTTAAGTACATTTAAACCAGTATGACTACATGTAAATACTGTAATCTATAGAATACCTGCAGGACCTATGCTGAGGATTGTTTGGTAACATTTGGCAGGGAGCTCAAGTTTCACAGTGAATATAATACCATAACTAAGTTCTATTAAACAGTGCTAAAGTTTGAACATTAACAGCCATTGAAAATCACATGGTCCCTTTTTTCCCAATGCATAGTATATTGCTATTAACCAAGTCCATAAGGAGAGCATGGTGTTAATAGGTCAAGGCTCACACAGTAATATGGCTTTCAAATGCACAGTCCTGTAAATATACTGATGAGAATCACAGTTTAGTACAGCATAAACCCaaattacagaactgtacaGAATGAACATAAGATTTCACACAGTTACACACTCCTATAAATTCTCTGATTTactcaatatattttttacactgTTCAAAACCtctcatgtattatttatactatGCAGTCAATCAGAACACAATTtgttaaaatgacaaactgagctgtaagaaacacaaacattaagaAGGATAGATCTCTGGATTAAAcagatctatttaaaataatctagaGCAATGGTCCTCAACCATGGTCCCCTaccctgttgtttttgttccaactgagttctcaattacttaattgcacccttaattgaaataatgtgcttacattttactttttaaattgtgtaactgaaaaaatgttgtttcctaaataagataagttccttatacaattttaaactcaACATTAAACCCCtaaggtttaaaataattataagatttctgatttaggaaattattagttcaattaaggttcaattaagtaattgagaactcggttggaacagaaaacagcagggtagggggtcctcgaggaccagggttgagaacctcTGAGCTGGAGTACAcgttttattgattttttttaccCGCACCAACTGAATGAATTGCTTAAATTAAGGGGGATTGTCTGAACAAtagacaaacacaaagacacactgacactcagtTCCCTGTGCTTCTCTGTGATTCACAGTAACACCCCCCTTGTGCCGGGAAGGTGATGGTCCAGACTGTCTCGGTCTCTGGCCCCCCTGTGGACGTGGGGTGTCTCCAGCGTGACCACTAGGGATCATGCTTCTCTCCCCCGCCGTACACCCTGCGGAGGCTGGAGTCCAGGAGGTAGTCCACTGACCTGTTGCAGAAGACATTCGTACCTTTACAATAATCCTCCCCAGCTTTAAACACTGGggctgtctctctgtgtctcaatGCAGAACATGACTTTCTGTTTCAGCAAATATACAAGTCTCTCAGGTCTGGCAATATACTGCGTTTTT

Function

GO: NA

KEGG:

id description
ko00920 Sulfur metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU149942 True 2011 lncRNA 0.38 2 25590572 25656954

Neighbor

gene id symbol gene type direction distance location
AMCG00018917 NA coding downstream 37480 25547542 ~ 25553092 (-)
AMCG00018916 NA coding downstream 57216 25489444 ~ 25533356 (-)
AMCG00018910 LOC108239856,LOC107385499,LOC103139559,LOC103366907 coding downstream 252519 25331301 ~ 25338053 (-)
AMCG00018911 ppp1cc,LOC107567955,LOC105902522,LOC108259981 coding downstream 275360 25303537 ~ 25315212 (-)
AMCG00018912 NA coding downstream 288870 25294104 ~ 25301702 (-)
AMCG00018925 slc35e4 coding upstream 687676 26344630 ~ 26356608 (-)
AMCG00018926 NA coding upstream 710396 26367350 ~ 26410785 (-)
AMCG00018928 rasl10a,LOC106584972 coding upstream 966870 26623824 ~ 26625548 (-)
AMCG00018931 ap1b1 coding upstream 1076313 26733267 ~ 26771289 (-)
AMCG00018933 gas2l1,LOC106580329 coding upstream 1168308 26825262 ~ 26825957 (-)
G119615 NA non-coding downstream 12450 25572054 ~ 25578122 (-)
G119600 NA non-coding downstream 111048 25479010 ~ 25479524 (-)
G119557 NA non-coding downstream 257397 25262362 ~ 25333175 (-)
G119466 NA non-coding downstream 545228 25044951 ~ 25045344 (-)
G119426 NA non-coding downstream 748451 24836787 ~ 24842121 (-)
G119655 NA non-coding upstream 61632 25718586 ~ 25718976 (-)
G119672 tbx3,LOC106563287,LOC106566936,LOC107670392,LOC107566860,LOC107728866 non-coding upstream 363273 26020227 ~ 26068649 (-)
G119673 tbx3,LOC106563287 non-coding upstream 419704 26076658 ~ 26078404 (-)
G119685 NA non-coding upstream 455910 26112864 ~ 26113153 (-)
G119691 NA non-coding upstream 462468 26119422 ~ 26151071 (-)
G119545 NA other downstream 403164 25186207 ~ 25187408 (-)
G119538 LOC108444117,LOC105014832,LOC106563153 other downstream 418928 25134771 ~ 25171644 (-)
AMCG00018898 NA other downstream 505986 25075398 ~ 25084586 (-)
G119144 NA other downstream 2784234 22804345 ~ 22806338 (-)
G118936 NA other downstream 3476877 22080464 ~ 22113695 (-)
AMCG00018929 NA other upstream 794770 26451724 ~ 26485315 (-)
AMCG00018930 NA other upstream 1120681 26777635 ~ 26797720 (-)
G119827 NA other upstream 1156526 26813480 ~ 26814073 (-)
G119893 LOC101154678 other upstream 1573919 27230873 ~ 27242574 (-)

Expression


Co-expression Network