G119637



Basic Information


Item Value
gene id G119637
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 25605031 ~ 25606144 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU149947
GTTGCAGAGGAAATagccttgaaataaataaagacttgaaAAGAAGGggtagaggaaaaaaaagttcaagATTGTTTCAAaggttttaattatgaaatcaCAAAAGTTGCACAACTATGAAACAAGTCCAGTCAGTCAGCAGTAAGCAGGCCCCTACTGCAGGTGTAACCCAGTCGGCCTCCCCTCCACATACACCGGTAGTAGCCTAGCCACAGTGCCCCCAGCAACATCAAGGGAACAACAAGGAAAGGCAGCCAGGTTGGGGATGAGCTCTCACCCTATGGCTCAGACAGGGCCTTTTTGATGGTGTGACTGTGCTCTCCAGGCTGCTCTTCATGATCGATCTTCACAGGCCCCAAAACAGTAGTGTAGGTCAGACCCTGGTCATCTGAGATGAAGAAGACATTCAGCTACTAGGGTGAAGGAGTTCGTACATCAACTTGCTCATGTAAAACACCTCCAGAACAGAAGTCAGGGTGCAAACTGGTGCACCATTGTACAACGGGCAAGGAGAGTCACAAAAATtgcctcattaaaaaaaaattaaacctgtTGATTTTGTGGACTCCTTTTTAATGCTGAAGCTCCAATTTCTCCTTGGAAGGAGAGGTTCAGGTTAGTGCACTTTACAGGGAGAGGGTGGAAATTCCTTCATGAGAGTTGGACAACCTCTCCAGTATGGCAGGGCAGCAGTGTGAGGAATACATCCTACCCATGCCTGCAGCTCGCTTCCTCCGCCGATTGCAGTTGGAGTCACAGCAGTTGCACAACCCATTCTGAGTGGGGGTTTCCAGAGACTCCCAGCTAGAAGTGGGGAGGGAAAGCAAAA

Function


GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA


RNA id representative length rna type GC content exon number start site end site
TU149947 True 829 lncRNA 0.48 2 25605031 25606144

Neighbor


gene id symbol gene type direction distance location
AMCG00018920 NA coding downstream 4368 25596536 ~ 25600663 (-)
AMCG00018917 NA coding downstream 51939 25547542 ~ 25553092 (-)
AMCG00018916 NA coding downstream 71675 25489444 ~ 25533356 (-)
AMCG00018910 LOC108239856,LOC107385499,LOC103139559,LOC103366907 coding downstream 266978 25331301 ~ 25338053 (-)
AMCG00018911 ppp1cc,LOC107567955,LOC105902522,LOC108259981 coding downstream 289819 25303537 ~ 25315212 (-)
AMCG00018925 slc35e4 coding upstream 738486 26344630 ~ 26356608 (-)
AMCG00018926 NA coding upstream 761206 26367350 ~ 26410785 (-)
AMCG00018928 rasl10a,LOC106584972 coding upstream 1017680 26623824 ~ 26625548 (-)
AMCG00018931 ap1b1 coding upstream 1127123 26733267 ~ 26771289 (-)
AMCG00018933 gas2l1,LOC106580329 coding upstream 1219118 26825262 ~ 26825957 (-)
G119615 NA non-coding downstream 26909 25572054 ~ 25578122 (-)
G119600 NA non-coding downstream 125507 25479010 ~ 25479524 (-)
G119557 NA non-coding downstream 271856 25262362 ~ 25333175 (-)
G119466 NA non-coding downstream 559687 25044951 ~ 25045344 (-)
G119426 NA non-coding downstream 762910 24836787 ~ 24842121 (-)
G119655 NA non-coding upstream 112442 25718586 ~ 25718976 (-)
G119672 tbx3,LOC106563287,LOC106566936,LOC107670392,LOC107566860,LOC107728866 non-coding upstream 414083 26020227 ~ 26068649 (-)
G119673 tbx3,LOC106563287 non-coding upstream 470514 26076658 ~ 26078404 (-)
G119685 NA non-coding upstream 506720 26112864 ~ 26113153 (-)
G119691 NA non-coding upstream 513278 26119422 ~ 26151071 (-)
G119545 NA other downstream 417623 25186207 ~ 25187408 (-)
G119538 LOC108444117,LOC105014832,LOC106563153 other downstream 433387 25134771 ~ 25171644 (-)
AMCG00018898 NA other downstream 520445 25075398 ~ 25084586 (-)
G119144 NA other downstream 2798693 22804345 ~ 22806338 (-)
G118936 NA other downstream 3491336 22080464 ~ 22113695 (-)
AMCG00018929 NA other upstream 845580 26451724 ~ 26485315 (-)
AMCG00018930 NA other upstream 1171491 26777635 ~ 26797720 (-)
G119827 NA other upstream 1207336 26813480 ~ 26814073 (-)
G119893 LOC101154678 other upstream 1624729 27230873 ~ 27242574 (-)

Expression



Co-expression Network