G119682


Basic Information

Item Value
gene id G119682
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 26107469 ~ 26107849 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU149998
ctagcagggatagaggactaatattacaagtgctgtcggaagagatgcgtcttgagtaagcgccggaatgaggtcaaggactctgctgttttgatttcagtgggcaggtcgttccaccacttaggggccagggatgagaaggagcgggctctggaggagggagagtggagaggaggcagagttagccttctggcactggaggagcgcagtggtctggaggggatgtatggagagatgagtgactgaaggtagcttggtgcagtgtggtcaagacagcggtaggtgagggtcaaagtcttgaattgaatgcgtgccgctatcgggagccagtggagggagcggagcagtggagtagtgtgtgcgaatattggcagagagaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU149998 True 381 lncRNA 0.55 1 26107469 26107849

Neighbor

gene id symbol gene type direction distance location
AMCG00018923 tbx3,LOC106563287 coding upstream 30207 26065643 ~ 26077262 (+)
AMCG00018921 med13l coding upstream 465001 25628737 ~ 25642468 (+)
AMCG00018919 NA coding upstream 496132 25601919 ~ 25611337 (+)
AMCG00018918 mtfp1,LOC102779258 coding upstream 514778 25584316 ~ 25592691 (+)
AMCG00018914 NA coding upstream 525075 25555456 ~ 25582394 (+)
AMCG00018924 tbx5,tbx5a,LOC107670381,LOC101474152 coding downstream 45806 26153655 ~ 26193484 (+)
AMCG00018927 NA coding downstream 323867 26431716 ~ 26438313 (+)
AMCG00018934 NA coding downstream 765001 26872850 ~ 26875837 (+)
AMCG00018936 NA coding downstream 939917 27047766 ~ 27048707 (+)
AMCG00018935 NA coding downstream 940997 27048846 ~ 27049202 (+)
G119669 NA non-coding upstream 29056 26039279 ~ 26078413 (+)
G119574 NA non-coding upstream 619320 25485845 ~ 25488149 (+)
G119529 LOC108239856,LOC103139559,LOC107385499,LOC103366907 non-coding upstream 769280 25331390 ~ 25338189 (+)
G119523 NA non-coding upstream 793974 25303186 ~ 25313495 (+)
G119429 NA non-coding upstream 1256419 24850836 ~ 24851050 (+)
G119684 NA non-coding downstream 5023 26112872 ~ 26113131 (+)
G119703 NA non-coding downstream 168536 26276385 ~ 26276585 (+)
G119750 NA non-coding downstream 334344 26442193 ~ 26444060 (+)
G119779 NA non-coding downstream 454942 26562791 ~ 26563013 (+)
G119786 NA non-coding downstream 524653 26632502 ~ 26632717 (+)
AMCG00018922 med13l other upstream 389043 25678677 ~ 25718426 (+)
AMCG00018913 NA other upstream 622023 25466091 ~ 25485446 (+)
G119507 NA other upstream 839688 25234082 ~ 25267781 (+)
AMCG00018820 NA other upstream 4209769 21848370 ~ 21897700 (+)
G118815 NA other upstream 4918223 21187956 ~ 21189246 (+)
G119762 NA other downstream 352771 26460620 ~ 26461227 (+)

Expression


Co-expression Network