Gene
RNA
| Item | Value |
|---|---|
| gene id | G119691 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 26119422 ~ 26151071 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0042692 | muscle cell differentiation | biological_process |
| GO:0051146 | striated muscle cell differentiation | biological_process |
| GO:0055004 | atrial cardiac myofibril assembly | biological_process |
| GO:0055014 | atrial cardiac muscle cell development | biological_process |
| GO:0005248 | voltage-gated sodium channel activity | molecular_function |
| GO:0005272 | sodium channel activity | molecular_function |
| GO:0015081 | sodium ion transmembrane transporter activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU150009 | True | 1174 | lncRNA | 0.44 | 2 | 26119422 | 26151071 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00018920 | NA | coding | downstream | 518759 | 25596536 ~ 25600663 (-) |
| AMCG00018917 | NA | coding | downstream | 566330 | 25547542 ~ 25553092 (-) |
| AMCG00018916 | NA | coding | downstream | 586066 | 25489444 ~ 25533356 (-) |
| AMCG00018910 | LOC108239856,LOC107385499,LOC103139559,LOC103366907 | coding | downstream | 781369 | 25331301 ~ 25338053 (-) |
| AMCG00018911 | ppp1cc,LOC107567955,LOC105902522,LOC108259981 | coding | downstream | 804210 | 25303537 ~ 25315212 (-) |
| AMCG00018925 | slc35e4 | coding | upstream | 193559 | 26344630 ~ 26356608 (-) |
| AMCG00018926 | NA | coding | upstream | 216279 | 26367350 ~ 26410785 (-) |
| AMCG00018928 | rasl10a,LOC106584972 | coding | upstream | 472753 | 26623824 ~ 26625548 (-) |
| AMCG00018931 | ap1b1 | coding | upstream | 582196 | 26733267 ~ 26771289 (-) |
| AMCG00018933 | gas2l1,LOC106580329 | coding | upstream | 674191 | 26825262 ~ 26825957 (-) |
| G119685 | NA | non-coding | downstream | 6269 | 26112864 ~ 26113153 (-) |
| G119673 | tbx3,LOC106563287 | non-coding | downstream | 41018 | 26076658 ~ 26078404 (-) |
| G119672 | tbx3,LOC106563287,LOC106566936,LOC107670392,LOC107566860,LOC107728866 | non-coding | downstream | 50773 | 26020227 ~ 26068649 (-) |
| G119655 | NA | non-coding | downstream | 400446 | 25718586 ~ 25718976 (-) |
| G119632 | NA | non-coding | downstream | 462468 | 25590572 ~ 25656954 (-) |
| G119713 | NA | non-coding | upstream | 168906 | 26319977 ~ 26343078 (-) |
| G119770 | NA | non-coding | upstream | 309547 | 26460618 ~ 26461160 (-) |
| G119774 | NA | non-coding | upstream | 349930 | 26501001 ~ 26501920 (-) |
| G119825 | NA | non-coding | upstream | 659813 | 26810884 ~ 26812556 (-) |
| G119826 | NA | non-coding | upstream | 662043 | 26813114 ~ 26813426 (-) |
| G119545 | NA | other | downstream | 932014 | 25186207 ~ 25187408 (-) |
| G119538 | LOC108444117,LOC105014832,LOC106563153 | other | downstream | 947778 | 25134771 ~ 25171644 (-) |
| AMCG00018898 | NA | other | downstream | 1034836 | 25075398 ~ 25084586 (-) |
| G119144 | NA | other | downstream | 3313084 | 22804345 ~ 22806338 (-) |
| G118936 | NA | other | downstream | 4005727 | 22080464 ~ 22113695 (-) |
| AMCG00018929 | NA | other | upstream | 300653 | 26451724 ~ 26485315 (-) |
| AMCG00018930 | NA | other | upstream | 626564 | 26777635 ~ 26797720 (-) |
| G119827 | NA | other | upstream | 662409 | 26813480 ~ 26814073 (-) |
| G119893 | LOC101154678 | other | upstream | 1079802 | 27230873 ~ 27242574 (-) |
