G119820 (gas2l1,LOC106580329)


Basic Information

Item Value
gene id G119820
gene name gas2l1,LOC106580329
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 26825215 ~ 26826592 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU150155
agatgatgatgattaataataccAGAGCTTATTGTAAAGGAAGCGTTTCACACGTGACTTACCAGTTCATCCAGATTGCGCATGTCACATAAGACCCTCCTCTGGTGCCAGGTGGGGTAGACTGTGACATCGGGCGGACTCTCCCCTACATTCTCTTCCCTTCCATAACCTCTACTGGGGGGGCTCGGTCGGGCTACTTCCCCGAGGTTTTCTTGGTCCCTAATTTCCTCTTCtatctcctcctccagctgaATCAGCATGGGGGCCAGCATCCCGAACTTGGCCCCTCTCCGCGCCACCTCAAGCAGGCACAGCACGAAGTTCTTCTCGTTCTTCCTCAAAACTAGATCGTTGGTCTCAAACATCAGCACGTCCTGGATCCACAGCTCCTGGCGGCACCAGGCAATAAAGTTGGACACGTTGTCCCGGGCCACGAAGGAGCCTGGAACGACGTTGCGAGACTGAAACAGCACATCTTTATGGGGCACCCTCATAGAGGTGGCAGCTTCGGGGTAGTCCTCCTGGAAGTCCTGCGCGGCACGATTAACGTTGTTGGCATGTCGACAGAGAGCACAGCCGGTCTCCAGACCCTCCATGAACCAGTCGGCTGTTATTTCCAGATCGTACAGAGTGTTGAGCCATTCTGCTAAATCCTCTTTCATAGCATATAGGTATTCCTCGCTGGACTTGAAAGGTCGTATGCTTTTGGATGCCGCCGACTGAATATTGCTTTGATCGGCCATTTTACAATCACTTAATTCTCTACAAACAATCCGAAGTTACCAGAATCTTAACAGCAAAAACAGACACGGAACGGGACAGTAGAAACATATTGAAGCAGACACGAAGAACAACTTGCTTTTCAGGGTGTCGTTCTCCGAGCAAGTCCTACTAGACACACAGCGTCAGTGGCATAAACGTTTGCATACATCCCCCGGCAGCCAAAGTCCTCGTTTTCCATGAGCTCCCCGTGGGAATGATGTGTAAAGCTGTTGGAAATAGAAAGCAGAAGAGAATCGATACCTGtttcagcacatcaccatgttTTTCCCAGCTGCTACCAGTTCTGTCATGCTCTCGAAAGATACAATATGATTCAGCTAATTTAAGTACCTCCCATTTCGTGTTGGCTAAGTTTTCCAAACGGCTTCCAACTGCTTCAGTGGGTTAAAAATATACGATTTGTGCTCTCTAAATTATGGGTGTAAAAAATGTatccctttcaaaatgttttccctCTGCACCGGTTACTGTACTAAACATGTTGACCTGCTTCGACTAAGACAGGACGATTCAGTGCTATATCTCATTACCAGCGGATAAGCTCCATATGAGAAAAAGTTAACCCTATGTAGGTCTCCCTGCCTGGATCCCTAGC

Function

symbol description
gas2l1 Predicted to enable actin filament binding activity; cytoskeletal anchor activity; and microtubule binding activity. Predicted to be involved in cytoskeleton organization; protein localization to microtubule plus-end; and regulation of microtubule polymerization or depolymerization. Predicted to be located in cytoskeleton. Predicted to be active in actin filament and cytoplasm. Predicted to colocalize with microtubule plus-end and stress fiber. Orthologous to human GAS2L1 (growth arrest specific 2 like 1).

NR:

description
PREDICTED: GAS2-like protein 1 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150155 True 1378 lncRNA 0.48 1 26825215 26826592

Neighbor

gene id symbol gene type direction distance location
AMCG00018927 NA coding upstream 386902 26431716 ~ 26438313 (+)
AMCG00018924 tbx5,tbx5a,LOC107670381,LOC101474152 coding upstream 631731 26153655 ~ 26193484 (+)
AMCG00018923 tbx3,LOC106563287 coding upstream 747953 26065643 ~ 26077262 (+)
AMCG00018921 med13l coding upstream 1182747 25628737 ~ 25642468 (+)
AMCG00018919 NA coding upstream 1213878 25601919 ~ 25611337 (+)
AMCG00018934 NA coding downstream 46258 26872850 ~ 26875837 (+)
AMCG00018936 NA coding downstream 221174 27047766 ~ 27048707 (+)
AMCG00018935 NA coding downstream 222254 27048846 ~ 27049202 (+)
AMCG00018939 dtx1 coding downstream 247204 27073796 ~ 27075433 (+)
AMCG00018942 NA coding downstream 375360 27201952 ~ 27202650 (+)
G119817 NA non-coding upstream 46555 26777653 ~ 26778660 (+)
G119816 NA non-coding upstream 49016 26775743 ~ 26776199 (+)
G119786 NA non-coding upstream 192498 26632502 ~ 26632717 (+)
G119779 NA non-coding upstream 262202 26562791 ~ 26563013 (+)
G119750 NA non-coding upstream 381155 26442193 ~ 26444060 (+)
G119834 NA non-coding downstream 18097 26844689 ~ 26849498 (+)
G119836 NA non-coding downstream 23034 26849626 ~ 26855442 (+)
G119897 NA non-coding downstream 454414 27281006 ~ 27281572 (+)
G119941 NA non-coding downstream 687727 27514319 ~ 27515546 (+)
G119940 NA non-coding downstream 691672 27518264 ~ 27519750 (+)
G119762 NA other upstream 363988 26460620 ~ 26461227 (+)
AMCG00018922 med13l other upstream 1106789 25678677 ~ 25718426 (+)
AMCG00018913 NA other upstream 1339769 25466091 ~ 25485446 (+)
G119507 NA other upstream 1557434 25234082 ~ 25267781 (+)
AMCG00018820 NA other upstream 4927515 21848370 ~ 21897700 (+)

Expression


Co-expression Network