G119929


Basic Information

Item Value
gene id G119929
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 27465387 ~ 27468649 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU150274
TGGGAAACCCCGCTGCCGATAAGATTACGTTAAAGGAAAATCCCTATTAAACAATCTGTAGAAGAAACTTCAATTCTGACTCAAGAATGGCCAGAAACACTTCTCTGTACTTTCGAATCGTGGAAGGAAGAAATCTACCTGCAAAAGATGTCTCTGGTACAAGTGATCCGTACTGTATTGTGAAAGTAGATAATGAGGTCGTGGCCAGTTAAggccagtgatggactggcgtcctgtcctgggtgtattcctgccttgcgccatatgcctgccgggattggGTCCAGCTTCCCCACAACcgtcaccaggataagcggtttcgaagatggatgaaggatggatggatattGCTAGTTAATTAAATAGTCACTAAATACAGTCAATACATCAATACAGTTATACACGTGAACACACGTTCATTAATGCAGCACACAATTAAGGAATTTATCGACAA

Function

NR:

description
PREDICTED: myelin-associated glycoprotein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150274 True 454 lncRNA 0.43 3 27465387 27468649

Neighbor

gene id symbol gene type direction distance location
AMCG00018948 rasal1,LOC106579924,LOC106585515 coding downstream 69161 27382003 ~ 27396226 (-)
AMCG00018947 LOC106585515 coding downstream 94017 27299590 ~ 27371370 (-)
AMCG00018940 NA coding downstream 240441 27217162 ~ 27224946 (-)
AMCG00018937 NA coding downstream 401406 26943064 ~ 27063981 (-)
AMCG00018938 LOC107673410,LOC107730716,LOC107592308 coding downstream 522373 26872894 ~ 26943014 (-)
AMCG00018946 NA coding upstream 84777 27553426 ~ 27567410 (-)
AMCG00018953 NA coding upstream 339493 27808142 ~ 27841558 (-)
AMCG00018952 NA coding upstream 394136 27862785 ~ 27878157 (-)
AMCG00018955 NA coding upstream 481063 27949712 ~ 27963857 (-)
AMCG00018954 NA coding upstream 506343 27974992 ~ 27984938 (-)
G119912 NA non-coding downstream 109355 27355825 ~ 27356032 (-)
G119891 NA non-coding downstream 187378 27222506 ~ 27278009 (-)
G119826 NA non-coding downstream 651961 26813114 ~ 26813426 (-)
G119825 NA non-coding downstream 652831 26810884 ~ 26812556 (-)
G119774 NA non-coding downstream 963467 26501001 ~ 26501920 (-)
G119944 NA non-coding upstream 37859 27506508 ~ 27507199 (-)
G119945 NA non-coding upstream 49963 27518612 ~ 27519715 (-)
G119956 sf3a1 non-coding upstream 102605 27571254 ~ 27572829 (-)
G119981 NA non-coding upstream 205197 27673846 ~ 27674566 (-)
G119986 NA non-coding upstream 264414 27733063 ~ 27733373 (-)
G119893 LOC101154678 other downstream 222813 27230873 ~ 27242574 (-)
G119827 NA other downstream 651314 26813480 ~ 26814073 (-)
AMCG00018930 NA other downstream 667667 26777635 ~ 26797720 (-)
AMCG00018929 NA other downstream 980072 26451724 ~ 26485315 (-)
G119545 NA other downstream 2277979 25186207 ~ 25187408 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_035358 rasal1b coding NC_007119.7 CM002892.2 1651821 ~ 1682945 (+)