G119963


Basic Information

Item Value
gene id G119963
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 27670633 ~ 27670834 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU150317
ATTGTATAAAACCGCATTTATATCTGTTTGCAGACAGATATAtcaagtcattttatttttttattttgctagaGTGAACAACTTAAAATCGCAAAACAAAGGTAACCAATCCGGTATCAACCACTCCCTGTAAACACATGCACAGTTAATATAGGAGTTTGACAATGAGGCCATCAGCGATGAGGTATGTACCTCACTTTTT

Function

GO:

id name namespace
GO:0030145 manganese ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150317 True 202 lncRNA 0.35 1 27670633 27670834

Neighbor

gene id symbol gene type direction distance location
AMCG00018949 NA coding upstream 7651 27625837 ~ 27662982 (+)
AMCG00018945 sf3a1 coding upstream 90382 27568440 ~ 27580251 (+)
AMCG00018944 slc7a4 coding upstream 156702 27500360 ~ 27513931 (+)
AMCG00018943 dgcr6,LOC101064501,LOC108430318 coding upstream 188612 27475501 ~ 27482021 (+)
AMCG00018941 dtx1 coding upstream 397370 27259930 ~ 27273263 (+)
AMCG00018950 LOC107092734,LOC103375490,LOC103470605,LOC106921081 coding downstream 70193 27741027 ~ 27742100 (+)
AMCG00018951 NA coding downstream 110793 27781627 ~ 27791861 (+)
AMCG00018957 NA coding downstream 553944 28224778 ~ 28235729 (+)
AMCG00018963 NA coding downstream 594178 28265012 ~ 28299406 (+)
AMCG00018964 NA coding downstream 669669 28340503 ~ 28342812 (+)
G119940 NA non-coding upstream 150883 27518264 ~ 27519750 (+)
G119941 NA non-coding upstream 155087 27514319 ~ 27515546 (+)
G119897 NA non-coding upstream 389061 27281006 ~ 27281572 (+)
G119836 NA non-coding upstream 815191 26849626 ~ 26855442 (+)
G119834 NA non-coding upstream 821135 26844689 ~ 26849498 (+)
G120029 NA non-coding downstream 244008 27914842 ~ 27915123 (+)
G120039 NA non-coding downstream 278563 27949397 ~ 27951723 (+)
G120078 NA non-coding downstream 521090 28191924 ~ 28202170 (+)
G120112 NA non-coding downstream 632213 28303047 ~ 28304416 (+)
G120155 NA non-coding downstream 719070 28389904 ~ 28390171 (+)
G119762 NA other upstream 1209406 26460620 ~ 26461227 (+)
AMCG00018922 med13l other upstream 1952207 25678677 ~ 25718426 (+)
AMCG00018913 NA other upstream 2185187 25466091 ~ 25485446 (+)
G119507 NA other upstream 2402852 25234082 ~ 25267781 (+)
AMCG00018820 NA other upstream 5772933 21848370 ~ 21897700 (+)

Expression


Co-expression Network