G120026


Basic Information

Item Value
gene id G120026
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 27899322 ~ 27899556 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU150405
cccacgtgcatcagtgagccttggccgcccatgaccctgtcgccagttcaccacttttccttccttggaccacttttgataggtactgaccactgcagaccaggaacaccccacaagagctgcatatttggagatgctctgacccagtcgtctagccatcacaatttggcccttgtcaaagtcgctcagatccttacgtttgcccatttttcctgcttctaacacatcaactttg

Function

GO:

id name namespace
GO:0070546 L-phenylalanine aminotransferase activity molecular_function
GO:0080130 L-phenylalanine molecular_function
GO:0008793 aromatic-amino-acid molecular_function

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU150405 True 235 lncRNA 0.51 1 27899322 27899556

Neighbor

gene id symbol gene type direction distance location
AMCG00018952 NA coding downstream 21165 27862785 ~ 27878157 (-)
AMCG00018953 NA coding downstream 57764 27808142 ~ 27841558 (-)
AMCG00018946 NA coding downstream 331912 27553426 ~ 27567410 (-)
AMCG00018948 rasal1,LOC106579924,LOC106585515 coding downstream 503096 27382003 ~ 27396226 (-)
AMCG00018947 LOC106585515 coding downstream 527952 27299590 ~ 27371370 (-)
AMCG00018955 NA coding upstream 50156 27949712 ~ 27963857 (-)
AMCG00018954 NA coding upstream 75436 27974992 ~ 27984938 (-)
AMCG00018956 lhx5 coding upstream 98599 27998155 ~ 28007014 (-)
AMCG00018961 rbm19 coding upstream 240000 28139556 ~ 28154700 (-)
AMCG00018959 NA coding upstream 277263 28176819 ~ 28189538 (-)
G119995 NA non-coding downstream 129523 27769555 ~ 27769799 (-)
G119988 LOC107092734,LOC103375490,LOC103470605,LOC103146723,LOC101486660 non-coding downstream 156287 27740932 ~ 27743035 (-)
G119986 NA non-coding downstream 165949 27733063 ~ 27733373 (-)
G119981 NA non-coding downstream 224756 27673846 ~ 27674566 (-)
G119956 sf3a1 non-coding downstream 326493 27571254 ~ 27572829 (-)
G120031 NA non-coding upstream 32111 27931667 ~ 27933173 (-)
G120145 NA non-coding upstream 454544 28354100 ~ 28354838 (-)
G120160 NA non-coding upstream 505457 28405013 ~ 28405304 (-)
G119893 LOC101154678 other downstream 656748 27230873 ~ 27242574 (-)
G119827 NA other downstream 1085249 26813480 ~ 26814073 (-)
AMCG00018930 NA other downstream 1101602 26777635 ~ 26797720 (-)
AMCG00018929 NA other downstream 1414007 26451724 ~ 26485315 (-)
G119545 NA other downstream 2711914 25186207 ~ 25187408 (-)

Expression


Co-expression Network