G120029


Basic Information

Item Value
gene id G120029
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 27914842 ~ 27915123 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU150408
ATAGGAACTTTCTGATATAATTcttctaaaaactaaaaaaaaaaaaatcaatcaaaaaacaGTTCAACAGGGGGTACAACATTTGATTTCTGTTGGAAATATGGAGATCACTTACAAGCATTCTTGGTGGGATTTTGCTTTTATAGGTGCTACTTTCTTATCTGTGTTAATTGTTactatgtgtatgttttattaccTATATCCTCTAATATGTACTTATTATAGTGATGTTATCACCATTCGGCGTGAGACATTAGTTTCATGTAATAAGCTTGGTAAATC

Function

GO:

id name namespace
GO:0048518 positive regulation of biological process biological_process
GO:0048522 positive regulation of cellular process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150408 True 282 lncRNA 0.30 1 27914842 27915123

Neighbor

gene id symbol gene type direction distance location
AMCG00018951 NA coding upstream 122981 27781627 ~ 27791861 (+)
AMCG00018950 LOC107092734,LOC103375490,LOC103470605,LOC106921081 coding upstream 172742 27741027 ~ 27742100 (+)
AMCG00018949 NA coding upstream 251860 27625837 ~ 27662982 (+)
AMCG00018945 sf3a1 coding upstream 334591 27568440 ~ 27580251 (+)
AMCG00018944 slc7a4 coding upstream 400911 27500360 ~ 27513931 (+)
AMCG00018957 NA coding downstream 309655 28224778 ~ 28235729 (+)
AMCG00018963 NA coding downstream 349889 28265012 ~ 28299406 (+)
AMCG00018964 NA coding downstream 425380 28340503 ~ 28342812 (+)
AMCG00018965 LOC102784149 coding downstream 439124 28354247 ~ 28369900 (+)
G119963 NA non-coding upstream 244008 27670633 ~ 27670834 (+)
G119940 NA non-coding upstream 395092 27518264 ~ 27519750 (+)
G119941 NA non-coding upstream 399296 27514319 ~ 27515546 (+)
G119897 NA non-coding upstream 633270 27281006 ~ 27281572 (+)
G119836 NA non-coding upstream 1059400 26849626 ~ 26855442 (+)
G120039 NA non-coding downstream 34274 27949397 ~ 27951723 (+)
G120078 NA non-coding downstream 276801 28191924 ~ 28202170 (+)
G120112 NA non-coding downstream 387924 28303047 ~ 28304416 (+)
G120155 NA non-coding downstream 474781 28389904 ~ 28390171 (+)
G120157 NA non-coding downstream 480763 28395886 ~ 28396754 (+)
G119762 NA other upstream 1453615 26460620 ~ 26461227 (+)
AMCG00018922 med13l other upstream 2196416 25678677 ~ 25718426 (+)
AMCG00018913 NA other upstream 2429396 25466091 ~ 25485446 (+)
G119507 NA other upstream 2647061 25234082 ~ 25267781 (+)
AMCG00018820 NA other upstream 6017142 21848370 ~ 21897700 (+)

Expression


Co-expression Network