AMCG00018977


Basic Information

Item Value
gene id AMCG00018977
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 200810 ~ 232866 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018977
ATGTGTGCGGGGATGTGCGTGGCCACGGGTGACCCTCACTACGTGTCGTTCGACGGGCGCGCCTTCTCCTTCCTGGGTGACTGTGAGTACGTTCTGGTGCAGGACAGCGAGGGGCGCTTCAGCCTGACGGCTCAGAACCTGCCCTGCGGCAGCTCAGGGGTCACCTGCACCAAGGACGTCACCCTCACCCTGGGCAACACCATCATACACCTGCTGagagGCCAGGCCGTGACGGTGAACGGCGCGCCCGTGTCTCTGCCCCGGCTGTACACCGGCAGTGGGCTGCGTCTGGAGCGGGCCGGGCTGTTCCTGTCCCTGAGCTCCACCCTGGGCCTCACAGTGCTGTGGGACGGAGcgatgcgtgtgtatgtgcgtCTGTCCCCAGAGCTCCGTGGCCGAGTCACCGGCCTGTGTGGGAATTTTGATGGCGACGCCGAGAACGACTTCACCTCCCGGCAGGGCATCGCCGAGTCCACCGCCGAGCTCTTCGCCAACTCCTGGAGGGTCAGCCCTAGCTGCCCGGAGGTCACAGGTCACGACCTCCGCGACCCCTGTGTGgtccATCCTCACCGTGCCCCGTGGGCGAGGAAGCGCTGTGCTGTGATCACACAGGAGCTGTTTGCCCCCTGTGACTCTGGAGGCGACTGTGAGTGTCTCTGCACCGCCATTGCTGCCTACGCAGAGGAATGCAACCAGCGCGGCATCTACATCCGCTGGAGGTCCCAGGAGCTCTGCCccCTGCAGTGTGAGAACGGTCTGGAGTACGAGGCCTGTGGCCCCGCCTGCACCCCGACCTGCGCCAGCCTAAGCGAGGCTCCCGACCCACACTGCAGCGCCCTGTCCTGTCTGGAGGGCTGCTTCTGCCCCCCCGGCACCGTCTTGCATGGTGACGGCTGCATCGCTCCCTCTGAGTGCCCCTGCCAGTGGGATGGCTCAGTCTTCCCCCCTGGCGCCGCCGTCACCCAGGACTGCCGCAACTGctCGTGCAGGGAGGGGGTTTGGGAGTGTGAAGGCTCTCCCTGTGTCCCGGCGCTGCTCTGCCAGGAGTTGGAGTTCCTGTGTGGCTCGGGCCGCTGCATCCCGGCCGCCTGGCTGTGCGATCACCAGGATGACTGCGGCGACGGCTCAGATGAGGCCTGCGCTTTCGACTGCGCCGTGGGGGAGTTCCGCTGCTCTGGAGGGCGCTGCCTGCCAGGAGCGCTGCACTGCGATGGCCACCCGGACTGTCCCGACCAGTCTGACGAGCAGGGCTGTCTCCCCGAACCACCCCCGCTGTGCCCCCCAGGGGAGTTTTCCTGCGCCAGCGGCCGCTGCCTGCCCATGGGCCTGGTGTGCGACGGACAGCCTGACTGTGGCTTCTCTGATGATTCTGACGAAgaggGCTGCAGGGAGCAGTGTGGGCCGGGGCAGTTCCAGTGTGCGGAGGGCAGCTGCGTGCCGTATGCCCAGCGCTGCGACGGACGGGCCGACTGCGCAGACCACGGTGACGAGCGCGGGTGCGTGTGCGCGCCTGGGGAGCTGCAGTGTCCAGGGGGGCAGTGTATCGGCCCCCACAGGGTGTGTGACGGACACCGAGACTGTGCGTCCGGCATCGACGAGGCCCTGTGCTCCCCCACAGTGACCTGTGGCCCCGGGCAGCTGGCCTGTGCGGAGGGCACCTGTGTGGCAGCAGCGCGGCTGTGCGACGGAGTGCCAGACTGCCGGGGGGGGGAGGACGAGAGCGAGGCGGACTGCGAGGACGGCAGCGACGAGCGCATGTGCGAGGGCGCCTGTGGGCCAGGTCAACACGCCTGCCTCAGCGGGGAGTGTGTGACGCACCAGCAGCTGTGCGATGGCACCCCCCACTGCAGAGACGCCTCAGATGAGAGCCCCGACACCTGCGGTGAGAACACCTCCACCAGCCGGTGTCCAGAGTACAGCTGCCTGGATGGCTCTTGCCTACCCTTCAGAAAGGTGTGTGACGGTGTTGCGGACTGTCCTGACGGCAGGCTGGGGCCGGGTGGGGTCCCCTCTGACGAGCAGGGCTGTGGCATCTGGGGCCCCTGGGGGCTGTGGAGTGAGTGCAGTCAAACCTGTGGCCCCGGGAACCAGAGCCGGCACAGACACTGCCCCCTGATGGAGCCACTCAGACACTGCCGTGGGGAGGACACCCAGAGACAGCAGTGCTTCCATACTGCCTGCCCAGTGGACGGGCAGTGGTTGCCCTGGGTGGCGTGGTCGAACTGCTCGGGGGGGTGTGGGGGCGTGGTGCTGCGGCAGAGGGGCTGTGTCCCTCCACAGAACGGTGGCCGACCCTGCGCTGAGCTCCCTGGACCCGTGCCCGTCGCAACAGAGATCAGTACTCAGCTGACACTGAGGTCCTGTGCCCCCTGCCCTCTGACCTGCGCTGACCTGGCCAATGAGGCGACCTGCGACCCCCAGGCCAGCTGCTTCTCTGGGTGCTGGTGTCCCGAGGGCCAGGTGATGGATGCGGCCCAGCGCTGCGTGCGGCCGGAGGAGTGTCCCTGTGAGGTTGGGGGGGTGCGGTACTGGCCCGGCCAGCCGGTGAAGACAGGCTGCCAGATCTGCACCTGCATGGGGGGGCGGCCCCAGCACTGCCGCAGCAACCCGGAGTGCTCAGTGCACTGCGGCTGGTCTTCCTGGTCTCCCTGGGGGGACTGTCTGGGCACCTGTGGGGTGCAGAGTGTTCAGTGGTCCTTCCGCAGTCCGAACAACCCCAGCAAGCACGGCCAAGGGCGGCACTGCCGGGGCATCTACCGCAAAGCCCGCCGGTGTCAATGGGACAGCCTCCACGACGATGACCCCAGCGTCCCTCGCACTCCGCACCGCGACCCCTGGCCCCCCAGAGAGCACAGGCCCTCCGGTCACCACCTACCCTCTCCCCCCTGGAGCGCGTCATCCCAGCTGCCAGGCCACCCCCCCCAGGCTGGCCGACTGCACGCCCACAACCCCCAGCGCGACCTGCAGGGCTGGAGCCCCGAGCCCGAGCACTACCACGCCCTGACCTCCTGGACCCCCGATGCCCCCGGCCCAGTCGACCCCGggTCTCGCTGGTTGTCCACTCCCATGCCCCCCGTGCCCTCTGTGTCTGCGGGGGGTTGTGTGGGGGGGCAGTTCCGCTGTGGGAACGGCCGGTGTGTGCagggggggccggggggggccTTCTCCTGCCCCACCCCAGGCAGCTGCATCTCCTCCTGGCTGCGCTGCGACGGCCGGCCGGACTGTCCTGACGGCACGGACGAGAAGGGGTGCGCCCCCCCACTGGACAGGAGCACGCCAAGGGCAGGACAGCGCGGGCCAGACGGGGGCACTAGCGAGGCAACAATCACCGTGTCTCCACAGCCTCCAGGCTCAGGGACCCCTGCCATGGCTGCTGTCACCCTCCCCCAGCCAGGGGGGTCCCCAGGGATGCCCACAATGCCGacGCCCCCGGGCGGAGGCTCTGAGCCCATAGCTGCGTGTGATGGCCCCCTGGGGCTGGAGGATGGTCGCATCCGGTACGGCCAGCTGAGCGCCTCCTCTGACCGCGAGAACAACCCCGCCGACGCCGGGCGCCTCAACATTGTCCCCAAtgtTTTGAACATGGAGCCGGGCTGGAGTCCCCGTCAGGACGACCTGCAGCCCTTCTTCCAAGTGGACTTCCTGCGGCCCACCTTCGTGTCCGGGGTGGAGTTCAGTGCGCGGGGGGACAGCAGTGTGCCGGAGCGACGCTCTCTGGGCCACAGGGTGTTGGCGCGGTTCCTCAGGATCCTGCCGGTGGCATTCACTCACACCTTCTATCTGCGCTCTGAGATACTGGGCTGTGTTGAGGgcacTGTGCAGCCTGTGTCTCTTACCACGGCCCCCCGGGAGAGCAACGACGCCAAGTCAGAGGGGGACGGAGTGACACTGCTGTCCCCCCCGCCCTCTCAGAGAGtTTCGCAGTCCTCTGCTGTGCCGGGGGTTCGAGAGCACACCGGCCCCACGGGGACCCCGGGGGTCCTAGGCTCCGTCACAGCGTCCTCTTCCAGGGGCCCCCTGCCCCTCGACCCCTCCTCGGCCTCTCACACCGGGGGGCCGGGGCTACACACTGGGGGGCCCCAAGATGGCCGCCCAGGCCTGGCCACGCCCCCACCCTCCACCACCGGGGCTCCAGGGCTGGGCCCCCAAAGGCCAGGAGCCTCAGGGGAACCGGGGATTCAGCCACTGCCGTTGGGCCCTACGCCCACCCctaccaccacccccacccctaaACAAGACATGTACAGCGAGTCAGGCACCACCGCCACCGCCAGCCCCGGCCTGCGCCCCCTGCCCCTCCTGCACACCACCACACAGCCGGCCCCCGTCTCCAGTGTGTGGACACCTACCCCTCCGGAGGGGGCCCCCGGATCACGGACACTGTGTGTGCAGTTCCAGTTTGCGTGTGTGGTATCGGGCTGCGTGGATGCCATGTTTGTGTGCGATGGACAGATGGACTGCCCCGATGGCTCCGATGAGATGCAGTGTGtGGACTGTGTCCTTTCCCCTTGGACGCAGTGGAGTCAGTGCAGCGTGTCCTGTGGCCTGGGCTCTGTGTTCCGGCAGCGGGACGTCCTAAGGGAGGCCGGGCCGGGGGGGGAGTGCGGCAGGGCTGGGTTCGACAGCCGCGCCTGCTTCATACAGGCCTGTCCCAtggaCGGTCAGTGGTCCAAGTGGTCAGCCTGGTCTGAGTGCGACGTGCGCTGCGGCGGGggggagagactgaggaacaGGAGCTGCTCCAACCCCCCACCCAAGAACCGGGGCCGGGATTGCCAGGGGGGGGGGACCCAGACAGAGAGCTGCAACACCCAGCCCTGCAGCCCCGTCCCCGGCACCGGCACGGGCTGTGGCGAGGGCATGGTGCTGGTTGGGGAGCCGGAGTGCCAGGCTGGTGCGGTGGAGCCCTGCCCCCTCACCTGCTCCCACCTGAGTGGCCAGACGAACTGCAGCGTCCCCTGCCTGACTGgCTGCCGTTGCCCTCCCGGCCTGTACCTACAGGGGCGCCGCTGTGTGAATTCCAGCCAGTGTTACTGCCTGTGGGATGGCCAGCTACTGCCACCAGGGCAGGAGGTCAGCACGAGGAACTGCACTCTATGtacgTGTCAGGAAGGGCGGGTCTCTTGCAACGACTCACTGTGCCCAGTCAACTGTGACTGGTCAGCCTGGTCATCGTGGACCCCGTGTGACAGCAGCTGCGGGGTGGGGCTGGAGCAGCGGTACAGGTCACCCCTGATCCAGCCCAGCGAGGAGGGTGGCCCCTTCTGCCCCGGGGACTCCGCTGAGGTTCGCAAGTGTCACACACCCTGCCCCACAGtGCCGGGTGGCTGGTCCCCCTGGTCCCCCTGGTCTCCATGCTCCTCAGACTGTGACTCAGGGGTTCAGACACGACGGCGCTCCTGCAGCGCCCCCCTGCCGCAGCACGGGGGCTCGCACTGCCCGGGGCCACACATGCAGACCGGGGACTGCaacacacagccctgcacagATGGCAGCAGCTGTCCGGCGGCACAGCAGCATGTCCAGTGTGCCGGGCGCTGCCCCCGCCACTGCGCTGACCTGCAGCAGGGCATCCAGTGTGAGGACAGCGCCCCCTGCCAGCCAGGCTGCCGCTGCCCAGAGGGTCTGCTGGAGCAGGAGGGGGTGTGTGTGGAGCCCTGGCAGTGTGACTGCACTGATGCGCAGGGGCAGAGCTGGGCGCCAGGCAGCTGGCATCAGGACGCCTGCAACAACTGCAGCTGCGCAGACGGACGCCTGTCGCTGACCTCGGAATTTGATGATGCGGACTGCCAATCGGAGGAGGCCCAGAACAAACCATGTGACCTGGCACCCTGCCCCCCACTCTGTGTCCGTGACGAGCAGGAGCTGCGGCTGGGAGACACGTGGCTGCAGGGGGAGTGCGCGCAGTGTACCTGCACGCCCGAGGGAGACTACTGCCAGCACATCGACTGTCGAGatgacCTGTGCCCATGGTCTGCTTGGTCAAGTTGCTCGCGGAGTTGCGGCGCGGGGGTGTCAACTCGCCGgcgcagctgtgtgtgtgaggaggcGGGGGGTCCCGGGGACTTGGCCTGCCCCCCCGGTACCGACGGAGCGAGGGAGCAGGAGGAGACACAGCTCTGCTACAGTCAGCCCTGCCCAGGTCACTGGACATACCCGGGCACtgcacactga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018977 True 6177 mRNA 0.68 41 200810 232866

Neighbor

gene id symbol gene type direction distance location
AMCG00018978 NA coding upstream 402 196318 ~ 200408 (+)
AMCG00018982 NA coding upstream 11094 185846 ~ 189716 (+)
AMCG00018979 NA coding downstream 523 233389 ~ 234148 (+)
AMCG00018980 NA coding downstream 1321 234187 ~ 237244 (+)
AMCG00018981 NA coding downstream 4384 237250 ~ 245772 (+)
AMCG00018983 NA coding downstream 13232 246098 ~ 255447 (+)
AMCG00018984 NA coding downstream 22607 255473 ~ 259291 (+)
G30554 NA non-coding downstream 22460 255326 ~ 255697 (+)
G30583 NA non-coding downstream 137580 370446 ~ 371798 (+)
G30619 NA non-coding downstream 210302 443168 ~ 496520 (+)
G30699 NA non-coding downstream 776395 1009261 ~ 1026744 (+)
G30700 NA non-coding downstream 780145 1013011 ~ 1053885 (+)
G30527 NA other upstream 126579 73792 ~ 74231 (+)
G30589 NA other downstream 162635 395501 ~ 398672 (+)
AMCG00018999 NA other downstream 316650 549516 ~ 556904 (+)
AMCG00019012 NA other downstream 506360 739226 ~ 744083 (+)
G30698 NA other downstream 762461 995327 ~ 1001213 (+)
AMCG00019029 NA other downstream 965120 1197986 ~ 1199095 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location