AMCG00018980


Basic Information

Item Value
gene id AMCG00018980
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 234187 ~ 237244 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018980
AtgattgtcatcatcatcatcatcatcatcatgactGAAACACAGTCAGAGACAGTGTGTATGTCCGTCAGTGAGTGGTCAGAGTGGACTCCCTGCTCCCCCTGCCAGCCCCTGACCTCCCTGCCAGCCGGCTCTCCTCCCCCAGCCGCAGGTCAGCTGGTGTCCCTGCAGCGCCGGTACCGGGCCTGTGTGGACCTGGACTCAGGATCGCCGGTGCTGGAAGGGGCAGGGCAGCTGTGTggggaggagctggaggaggagcgaCTGTGCCCAGATGCCCTTGCCTGTCAGGACGTGTGCCAGTGGAGCCCCTGGGGCGCCTGCAGGGAGCCGTGCAGCGGGGGCTTCCGCCAGCGCCTCCGCCACCCACAGGGCCCGGTGCCCATGCAGCACTGCCCTCGCCCCCATGCCCAGACTCAGAGCTGCAACACTGTCCTGTGCCCAGGTGAGCGCTGTGAGGACAGGGGGAAGGTGTTCGGGGCGTCCTGTGCCAATCGCTGCCCCCGGAGCTGTGCTGACCTCTGGGAGCACGTGCAGTGTCTGCAGGGATCCTGCCACCCTGGCTGCCGCTGTGCGGAGGGCTGGCTGCTGCAGGACAGCTTCTGTGTGCCGGTGTCGGAGTGCCGCTGCGGCCTCCCTGTGGACAACAGCACCCTGGAGCTGCTGCCGGGGCAGAGCGTGGCTCTGGACTGCAACAGCTGGTGA

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05322 Systemic lupus erythematosus

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018980 True 705 mRNA 0.67 5 234187 237244

Neighbor

gene id symbol gene type direction distance location
AMCG00018979 NA coding upstream 39 233389 ~ 234148 (+)
AMCG00018977 NA coding upstream 1321 200810 ~ 232866 (+)
AMCG00018978 NA coding upstream 33779 196318 ~ 200408 (+)
AMCG00018982 NA coding upstream 44471 185846 ~ 189716 (+)
AMCG00018981 NA coding downstream 6 237250 ~ 245772 (+)
AMCG00018983 NA coding downstream 8854 246098 ~ 255447 (+)
AMCG00018984 NA coding downstream 18229 255473 ~ 259291 (+)
AMCG00018990 NA coding downstream 174239 411483 ~ 414872 (+)
AMCG00018989 NA coding downstream 222915 460159 ~ 473258 (+)
G30554 NA non-coding downstream 18082 255326 ~ 255697 (+)
G30583 NA non-coding downstream 133202 370446 ~ 371798 (+)
G30619 NA non-coding downstream 205924 443168 ~ 496520 (+)
G30699 NA non-coding downstream 772017 1009261 ~ 1026744 (+)
G30700 NA non-coding downstream 775767 1013011 ~ 1053885 (+)
G30527 NA other upstream 159956 73792 ~ 74231 (+)
G30589 NA other downstream 158257 395501 ~ 398672 (+)
AMCG00018999 NA other downstream 312272 549516 ~ 556904 (+)
AMCG00019012 NA other downstream 501982 739226 ~ 744083 (+)
G30698 NA other downstream 758083 995327 ~ 1001213 (+)
AMCG00019029 NA other downstream 960742 1197986 ~ 1199095 (+)

Expression


Co-expression Network