AMCG00018996


Basic Information

Item Value
gene id AMCG00018996
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 363203 ~ 382072 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018996
ATGGACACTGCAGAGATCAGCAGGACAGTAGTGGACAGACTGACCGTGCACAATACCGGGGCGGACAGACGCCAGTGCAGCACCAGGAAGCCCAGGGGGAAGTGCGGCCCATTGCAGAGCAGCACATACTGGCTGCTGACTTCCTGTCAGGGATGTTGGGTGTCCCGGAGGTGTGGGGGTCTCAGCCAGGCCCTCCTCAGCCGAAGCTCGGCAGCCCGTTGCCCCCCCGTCGCCACGGTGATCAGCCTGGCGTGCGAGGAGGCCGCGGGcagggggggcagggagagCGAGGGGCCGGACCGCAGGCAGCAGcaccagaagaagaagaagaagaggaggccGAGGGAGGAGGCGTGGGACCTCCCCCAGGGGCCCCCCTCAGAGAACACGCCACCTGTGGCCTCCCCGTTCACCCCTTACAGGATCCCCCCCCGCCGGGAGGAGGGCTGGGAGCACGAGGACTGGGGTGGGCGGCCAGGCAGGGGCAAGAAGGGCAAGGGCAGGAGGAGAgggcaggagggggagggggagagggacgGGGACTCGCCGATAGCCCCCACTGTCCACCCGCCGGCCCCCCAGCCTGATGGACAGAGGGGCAAACAAGATGTGCCCAGCACTCAACAGCTCACTGCTGCTCCAGCCCCCACCCACAACCAGGAGAAGACCCCTGTGCCAGGTGCTCCCCTGCTCCCCCCTGCTGCCTCCCCGACAGGACccagctgccccccccacaTTGTGCAGGCCCCTGCCTGTCCCGCAGCTGTTGACACAGCCCCCCCCTCACTCTCGCAGCCCCCCACTTCCTCTCCCAAACTGCCTAAAGATGCCCCTGCACTGGAGCCAGtaattgAGAAATTCTTCACACTTGGACGAAGACACTTCTATGTTGCGGATGGGTCAGTACTGTTTTATCCTTATTACTGTGTTTCCTGGTACatgtgtcctctctctctctctctctctctctctccctctctctctccctcactcctcgggtgtctgtgtgacagtgtggcgcagctgcagcagcactgtGTAATTTTGGGGGCAGGTTTTCGGAGTGTCAGGGCTGGCTGTCACTGTGAGAGCTCGTTAACACAGCGAGAGGACGCTGGAGGAGAGGGGAGTGGTGCTGACTGTCAGTCACGTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018996 True 1155 mRNA 0.64 6 363203 382072

Neighbor

gene id symbol gene type direction distance location
AMCG00018987 NA coding downstream 53221 298834 ~ 309982 (-)
AMCG00018986 NA coding downstream 72300 281834 ~ 290903 (-)
AMCG00018985 NA coding downstream 165605 191794 ~ 197598 (-)
AMCG00018974 LOC107574283 coding downstream 191213 168042 ~ 171990 (-)
AMCG00018976 NA coding downstream 262949 94817 ~ 100254 (-)
AMCG00018995 NA coding upstream 351 382423 ~ 390814 (-)
AMCG00018993 NA coding upstream 23297 405369 ~ 411757 (-)
AMCG00018994 NA coding upstream 34084 416156 ~ 418266 (-)
AMCG00019003 maf1 coding upstream 95955 478027 ~ 496837 (-)
AMCG00019001 gpaa1 coding upstream 132731 514803 ~ 518847 (-)
G30594 sspo non-coding downstream 95276 266073 ~ 267927 (-)
G30593 NA non-coding downstream 103138 259434 ~ 260065 (-)
G30539 NA non-coding downstream 289053 73888 ~ 74150 (-)
G30612 NA non-coding upstream 31816 413888 ~ 414282 (-)
G30760 NA non-coding upstream 140047 522119 ~ 523996 (-)
G30784 NA non-coding upstream 330640 712712 ~ 733413 (-)
G30797 NA non-coding upstream 452386 834458 ~ 839109 (-)
G30809 NA non-coding upstream 505577 887649 ~ 894190 (-)
AMCG00018988 NA other downstream 25570 225374 ~ 337633 (-)
AMCG00018975 kcnh2b,kcnh2,LOC107713341,LOC106590277 other downstream 208678 144253 ~ 154525 (-)
AMCG00018992 NA other upstream 70883 452955 ~ 454764 (-)
AMCG00018991 NA other upstream 91377 473449 ~ 477096 (-)
G30729 NA other upstream 116660 498732 ~ 500189 (-)
AMCG00019007 LOC106613553,LOC108443229 other upstream 232326 614398 ~ 634293 (-)
G30849 NA other upstream 792452 1174524 ~ 1174983 (-)

Expression


Co-expression Network