AMCG00018997


Basic Information

Item Value
gene id AMCG00018997
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 559335 ~ 560597 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018997
ATGCTGCAGGCGGGCtctgtgcagctcctgtgccTGACGGCCAGCAGTGGAGTGCCCCTGTTCTGCCGCGGTGCGTCCCGCCAGCTGCCCTTCTCCGTGATCGGCTCCCTGAATGGCGTGCACATGTTTGGCGGGGGCCAGGGGGCCGCGCTGGCAAGCTGTGTGACGGAGCGCGGCGGCCGTGTGGCATGGCAGGTCTTCCAGGACAGTGTGACGCTCATCGCCGTGAGCGCCGAGGAGAGCAGCGACGCCTCCAGTGAGCTGCAGCTGCGCCGCCTGCTGGAAAACACTTGGAACTGCatggtgctgctgctggggctgGATGAGCTGGCCACCGTGAGGAACGTGGAGCGGCTGAAGAGGGACCTGCGCTCCTGCTACCAGCTCATCGATGCCTTCTTGGAGGGCCCGGCCGAGGGGCTTGGGGACCTGACGCATTGCGCTGACTGCCTGGCACCTACGCATCCCGACCTGCTGCAGGAGGCGCTGGACTCCTTCTCCCGTGCTGCTGACAGCGAGTTCGGCTGCCTGCTGGTTCACGGCAGCGTCGCGGCCGCCACGGAGAAGTGGTGGCGTCTGGCTCCGCAGGAGGTGGTGCTGCTGTCGGCCCTGGTGCGCACCCTGGGCGGTGCATCCTCCTGCGACCACCCCGTTTTCCTGCCCCAGGGAAGCCCCACCGTGCCCCACCGCCTACTCTGCTTCCAGCTGCTGCCTGGGGTGCAGGTGTGCGTGCTGTGCGGCCCCAGCCCCTCGCTGCAGAGAGCGGAGGGTGAGCTGGTGGTGCGCTTCTGGGCCCCCGTGGCGGAGGCCCTGCGGGGCTGCCTTGCCCTGCGGCAGCGTGGCCTGCCCGGCTCCGTGCCACTGCGGCGCGGCATCCTGGGGCTGCTGCTGGTGAACCGCGAGTCCCGCCGTGCACTCTCCTCCGTGCACCTGTGGCCCGACGCCCCTCCGGACGCCCCCTGCCCCCTGCGCCGCTGGCAGCTGCTGCGGCTCTTCTACGTGCTGGCTGCCACACGCTACTTCCCCCCCGAGGAGGTGCAGAGCGAGCGGCGGCACGGAGAGGTCCTGGATGAAGACTTCGCCGCCGGCTTCCCCCACCAGCCCCTGCAGTGCTACCTGGCCACAGACGAGTGCAAGTGCTTCGGCCTGCAGACCCCCCAGCACCAGCTCTACTTGCTGACCTCCGCCAGCCTGCCCACCTTCGCCCTGCGGCCCCTCGCCACCCACACCCTGGCCACCCTGCTCGGCCACGCCGGAGTTTGA

Function

GO: NA

KEGG:

id description
K22861 FUZ, CPLANE3; protein fuzzy

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018997 True 1263 mRNA 0.70 1 559335 560597

Neighbor

gene id symbol gene type direction distance location
AMCG00019000 NA coding upstream 44904 506635 ~ 514431 (+)
AMCG00018998 exosc4,exos4 coding upstream 55904 498649 ~ 503431 (+)
AMCG00018989 NA coding upstream 86077 460159 ~ 473258 (+)
AMCG00018990 NA coding upstream 144463 411483 ~ 414872 (+)
AMCG00018984 NA coding upstream 300044 255473 ~ 259291 (+)
AMCG00019004 gpt,LOC103482433 coding downstream 15360 575957 ~ 586263 (+)
AMCG00019005 NA coding downstream 37231 597828 ~ 599198 (+)
AMCG00019008 NA coding downstream 48178 608775 ~ 623347 (+)
AMCG00019009 NA coding downstream 140727 701324 ~ 702246 (+)
AMCG00019011 NA coding downstream 183557 744154 ~ 751040 (+)
G30619 NA non-coding upstream 62815 443168 ~ 496520 (+)
G30583 NA non-coding upstream 187537 370446 ~ 371798 (+)
G30549 NA non-coding upstream 277191 227976 ~ 282144 (+)
G30699 NA non-coding downstream 448664 1009261 ~ 1026744 (+)
G30700 NA non-coding downstream 452414 1013011 ~ 1053885 (+)
G30723 NA non-coding downstream 577908 1138505 ~ 1139858 (+)
G30857 NA non-coding downstream 625800 1186397 ~ 1187225 (+)
G30866 NA non-coding downstream 635335 1195932 ~ 1196202 (+)
AMCG00018999 NA other upstream 2431 549516 ~ 556904 (+)
G30589 NA other upstream 160663 395501 ~ 398672 (+)
G30527 NA other upstream 485104 73792 ~ 74231 (+)
AMCG00019012 NA other downstream 178629 739226 ~ 744083 (+)
G30698 NA other downstream 434730 995327 ~ 1001213 (+)
AMCG00019029 NA other downstream 637389 1197986 ~ 1199095 (+)
AMCG00019030 NA other downstream 653079 1213676 ~ 1237637 (+)
G30877 arhgap39,LOC106560380,LOC106584197 other downstream 692769 1253366 ~ 1253735 (+)

Expression


Co-expression Network