AMCG00019005


Basic Information

Item Value
gene id AMCG00019005
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 597828 ~ 599198 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019005
AAATGTTTCCTAACTCGAAATCTGCCACTGCCTTCGCCTGCAAATGAACCAAGGCCACCCAGAAATGGACCGTTTTCGTTACTCATTGATGAAATTAATGACAAGAACTATGATAAATGCTTTGTCGTGCTGGTTCAGCTCTTCAACCTGGAGTCAGGAACAAACACCAGGATCCTTGACCTTCCAGTGCTTTCTGGATGGACAGCGGAGGATGTGTTTGCTGCAGTTACCACAGTGATTGATGGGCAGAATATTCCCTGGAAGAACATGGTCGGATTTACTAGTGACACCTGCAATGTGATGATGGGCCAGCACAACTCCATCCTGTCTCGTCTGCGAGAGAAGAACCCGGATATTTTCACCCTTGGCTGCATCTGTCATCTGGCCAACCTCTGCGCTAAAGCTGCCATCAAGGTGATGTCTGTTCCAGTGGATGACATCTTGATTGACATCTACTACTTCTTTGAGCACAGGTATGAATTCATCCTTCCACTGCTGAACAATTTCAACAAAGTCTTTCAGGCTGACAAGTCCCAGGTGGGCAGGCTTATTCCAGAGATGACAAGGCTGCTCAAAAAGTTAATGTGCAAGTTTGTGAAGATGCATCTGATCAAGGGCACTGAACTGACTGAAGTAGACTATTCAGACAGACAAAACCAGCTGCCTGATGATGTGCTAGCTGTTGGCTTGGCTGATTGTGAGGAGATTTCACCAGCCACACAACACAAGTTCCTGGCTAATGTGCGCTCTTTCTATGTTGCCTGTGTTAAGAAGATGCTCGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019005 True 783 mRNA 0.46 3 597828 599198

Neighbor

gene id symbol gene type direction distance location
AMCG00019004 gpt,LOC103482433 coding upstream 11565 575957 ~ 586263 (+)
AMCG00018997 NA coding upstream 37231 559335 ~ 560597 (+)
AMCG00019000 NA coding upstream 83397 506635 ~ 514431 (+)
AMCG00018998 exosc4,exos4 coding upstream 94397 498649 ~ 503431 (+)
AMCG00018989 NA coding upstream 124570 460159 ~ 473258 (+)
AMCG00019008 NA coding downstream 9577 608775 ~ 623347 (+)
AMCG00019009 NA coding downstream 102126 701324 ~ 702246 (+)
AMCG00019011 NA coding downstream 144956 744154 ~ 751040 (+)
AMCG00019013 NA coding downstream 181195 780393 ~ 780629 (+)
AMCG00019017 NA coding downstream 238801 837999 ~ 847327 (+)
G30619 NA non-coding upstream 101308 443168 ~ 496520 (+)
G30583 NA non-coding upstream 226030 370446 ~ 371798 (+)
G30549 NA non-coding upstream 315684 227976 ~ 282144 (+)
G30699 NA non-coding downstream 410063 1009261 ~ 1026744 (+)
G30700 NA non-coding downstream 413813 1013011 ~ 1053885 (+)
G30723 NA non-coding downstream 539307 1138505 ~ 1139858 (+)
G30857 NA non-coding downstream 587199 1186397 ~ 1187225 (+)
G30866 NA non-coding downstream 596734 1195932 ~ 1196202 (+)
AMCG00018999 NA other upstream 40924 549516 ~ 556904 (+)
G30589 NA other upstream 199156 395501 ~ 398672 (+)
G30527 NA other upstream 523597 73792 ~ 74231 (+)
AMCG00019012 NA other downstream 140028 739226 ~ 744083 (+)
G30698 NA other downstream 396129 995327 ~ 1001213 (+)
AMCG00019029 NA other downstream 598788 1197986 ~ 1199095 (+)
AMCG00019030 NA other downstream 614478 1213676 ~ 1237637 (+)
G30877 arhgap39,LOC106560380,LOC106584197 other downstream 654168 1253366 ~ 1253735 (+)

Expression


Co-expression Network